Commit f9242fcd authored by Dany Dumont's avatar Dany Dumont

Minor changes

parent efeab549
......@@ -5,45 +5,43 @@
----------------------------------------------------
The model has been designed to be very user-friendly, however some modifications
must be done to fit with your machine.
So, please read the following steps to correctly start the model.
The model has been designed to be very user-friendly. However some modifications
must be done to work on your machine, so please read the following steps to
correctly start the model.
1) COMPILATION
1) COMPILATION:
-Ensure first that gfortran is installed on your machine.
-Ensure that the NETCDF FORTRAN libraries are installed on your machine.
-Change the path for the NETCDF FORTRAN module and libraries in the makefile
-compile the source codes using the command «make». The executable will be
created in the parent directory.
- you can also delete all object file and the executable by using the command «make mrproper»
- Ensure first that gfortran is installed on your machine.
- Ensure that the NETCDF FORTRAN libraries are installed on your machine.
- Change the path for the NETCDF FORTRAN module and libraries in the makefile.
- Compile the source codes using the command 'make'. The executable will be
created in the parent directory.
- You can also delete all object file and the executable by using the command
'make mrproper'.
2) USE THE MODEL
- The model use namelists in nml/ allowing to change some parameter values without recompiling
the source code
- outputs will be generated in the directory output/
- The model use namelists in nml/ allowing to change some parameter values
without recompiling the source code.
- Outputs will be generated in the directory output/.
3) USE THE MODEL WITH GOTM
- The model can call GOTM to produce a diffusivity profile. If you want to use this feature
you have to change the value of the parameter «mix_state» in the namelist model_parameter
- Before doing this, ensure that GOTM is installed on your machine and copy all the GOTM namelists
you need in the directory gotm/. You should also create a symbolic link of the executable in the
directory gotm/
- The model can call GOTM to produce a diffusivity profile. If you want to
use this feature you have to change the value of the parameter 'mix_state'
in the namelist 'model_parameter'.
- Before doing this, ensure that GOTM is installed on your machine and copy
all the GOTM namelists you need in the directory gotm/. You should also
create a symbolic link of the executable in the directory gotm/.
4) USE BATCH MODE
- you can also run the model in batch mode. To do this, you must change the file
batch_bio_pbs.sh
have fun
- You can also run the model in batch mode. To do this, you must change the
file batch_bio_pbs.sh
Have fun!
for question, please contact me at baudryjeremy@gmail.com
For question, please contact me at baudryjeremy@gmail.com
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment