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Dany Dumont
phlag
Commits
765a18ea
Commit
765a18ea
authored
Mar 14, 2018
by
Dany Dumont
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parent
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HELP/HOW_TO_USE_THE_MODEL
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765a18ea
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@@ -5,43 +5,45 @@
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@@ -5,43 +5,45 @@
----------------------------------------------------
----------------------------------------------------
The model has been designed to be very user-friendly
. H
owever some modifications
The model has been designed to be very user-friendly
, h
owever some modifications
must be done to
work on
your machine
, so please read the following steps to
must be done to
fit with
your machine
.
correctly start the model.
So, please read the following steps to
correctly start the model.
1) COMPILATION
- Ensure first that gfortran is installed on your machine.
1) COMPILATION:
- Ensure that the NETCDF FORTRAN libraries are installed on your machine.
- Change the path for the NETCDF FORTRAN module and libraries in the makefile.
-Ensure first that gfortran is installed on your machine.
- Compile the source codes using the command 'make'. The executable will be
-Ensure that the NETCDF FORTRAN libraries are installed on your machine.
created in the parent directory.
-Change the path for the NETCDF FORTRAN module and libraries in the makefile
- You can also delete all object file and the executable by using the command
'make mrproper'.
-compile the source codes using the command «make». The executable will be
created in the parent directory.
- you can also delete all object file and the executable by using the command «make mrproper»
2) USE THE MODEL
2) USE THE MODEL
- The model use namelists in nml/ allowing to change some parameter values
- The model use namelists in nml/ allowing to change some parameter values
without recompiling
without recompiling
the source code
.
the source code
-
O
utputs will be generated in the directory output/
.
-
o
utputs will be generated in the directory output/
3) USE THE MODEL WITH GOTM
3) USE THE MODEL WITH GOTM
- The model can call GOTM to produce a diffusivity profile. If you want to
- The model can call GOTM to produce a diffusivity profile. If you want to use this feature
use this feature you have to change the value of the parameter 'mix_state'
you have to change the value of the parameter «mix_state» in the namelist model_parameter
in the namelist 'model_parameter'.
- Before doing this, ensure that GOTM is installed on your machine and copy all the GOTM namelists
- Before doing this, ensure that GOTM is installed on your machine and copy
you need in the directory gotm/. You should also create a symbolic link of the executable in the
all the GOTM namelists you need in the directory gotm/. You should also
directory gotm/
create a symbolic link of the executable in the directory gotm/.
4) USE BATCH MODE
4) USE BATCH MODE
- You can also run the model in batch mode. To do this, you must change the
- you can also run the model in batch mode. To do this, you must change the file
file batch_bio_pbs.sh
batch_bio_pbs.sh
have fun
Have fun!
F
or question, please contact me at baudryjeremy@gmail.com
f
or question, please contact me at baudryjeremy@gmail.com
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