Commit 54645489b3ba54329d1abfb04b853aa6739fd939

Authored by Marion Bandet
1 parent 2b149458
Exists in master

update HFR direction

Showing 31 changed files with 223 additions and 73 deletions   Show diff stats
build/doctrees/Comparison_WERA-ADCP_Sept2013.doctree
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build/doctrees/dailylog.doctree
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build/doctrees/environment.pickle
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build/html/Comparison_WERA-ADCP_Sept2013.html
@@ -56,7 +56,7 @@ @@ -56,7 +56,7 @@
56 <p>1- we choose a site to analyze, either PAO (site 1) or PAB (site 2)</p> 56 <p>1- we choose a site to analyze, either PAO (site 1) or PAB (site 2)</p>
57 <div class="figure align-center"> 57 <div class="figure align-center">
58 <img alt="_images/sites.png" src="_images/sites.png" /> 58 <img alt="_images/sites.png" src="_images/sites.png" />
59 -<p class="caption">location of HFRs domain in the St Lawrence estuary</p> 59 +<p class="caption"><em>location of HFRs domain in the St Lawrence estuary</em></p>
60 </div> 60 </div>
61 <p>2- we load the bathymetry and the HFR sites&#8217;coordinates</p> 61 <p>2- we load the bathymetry and the HFR sites&#8217;coordinates</p>
62 <p>3- we specify if we use the &#8220;old&#8221; or &#8220;new&#8221; calibrations. Usually &#8220;New&#8221;.</p> 62 <p>3- we specify if we use the &#8220;old&#8221; or &#8220;new&#8221; calibrations. Usually &#8220;New&#8221;.</p>
@@ -86,35 +86,75 @@ @@ -86,35 +86,75 @@
86 </div> 86 </div>
87 <div class="figure align-center"> 87 <div class="figure align-center">
88 <img alt="_images/Radial_ADCPbin2_HFR_PAO_version5_Sept2013.png" src="_images/Radial_ADCPbin2_HFR_PAO_version5_Sept2013.png" /> 88 <img alt="_images/Radial_ADCPbin2_HFR_PAO_version5_Sept2013.png" src="_images/Radial_ADCPbin2_HFR_PAO_version5_Sept2013.png" />
89 -<p class="caption">Hourly radial currents from ADCP bin 2 and HFR WERA at PAO - September 2013</p> 89 +<p class="caption"><em>Hourly radial currents from ADCP bin 2 and HFR WERA at PAO - September 2013 - superimposed are the 48-h averages</em></p>
90 <div class="legend"> 90 <div class="legend">
91 -Superimposed are the 48-h averages</div> 91 +<ul class="simple">
  92 +<li>We then look for the HFR grid point nearest the ADCP position at the time of interest.</li>
  93 +</ul>
  94 +</div>
92 </div> 95 </div>
93 <div class="figure align-center"> 96 <div class="figure align-center">
94 <img alt="_images/explecoveragegrid2.png" src="_images/explecoveragegrid2.png" /> 97 <img alt="_images/explecoveragegrid2.png" src="_images/explecoveragegrid2.png" />
95 -<p class="caption">We find the HFR Radial velocity at this position and project it onto zonal and meridional components.</p> 98 +<p class="caption"><em>example of grid coverage</em></p>
96 <div class="legend"> 99 <div class="legend">
97 -We store all the meaningful parameters into a structure named radar.</div> 100 +<ul class="simple">
  101 +<li>We find the HFR Radial velocity at this position and project it onto zonal and meridional components.</li>
  102 +<li>We store all the meaningful parameters into a structure named radar.</li>
  103 +</ul>
  104 +</div>
98 </div> 105 </div>
99 <p>This analysis allows us to compare radial velocity components from each HFR site with the ADCP components.</p> 106 <p>This analysis allows us to compare radial velocity components from each HFR site with the ADCP components.</p>
100 </div> 107 </div>
101 <div class="section" id="hfr-direction"> 108 <div class="section" id="hfr-direction">
102 <h1>HFR direction<a class="headerlink" href="#hfr-direction" title="Permalink to this headline">¶</a></h1> 109 <h1>HFR direction<a class="headerlink" href="#hfr-direction" title="Permalink to this headline">¶</a></h1>
103 <p>To verify that the HFR looks in the right direction:</p> 110 <p>To verify that the HFR looks in the right direction:</p>
104 -<p>For each time step of the time period of interest, we compute the distance from the HFR site to each grid point. We select the grid points that are at the same range from the HFR site than the grid point closest to the ADCP.</p> 111 +<p># For each time step of the time period of interest, we compute the distance from the HFR site to each grid point. We select the grid points that are at the same range from the HFR site than the grid point closest to the ADCP.</p>
105 <div class="figure align-center"> 112 <div class="figure align-center">
106 <img alt="_images/explecoveragegrid_rangeADCP.png" src="_images/explecoveragegrid_rangeADCP.png" /> 113 <img alt="_images/explecoveragegrid_rangeADCP.png" src="_images/explecoveragegrid_rangeADCP.png" />
107 </div> 114 </div>
108 <div class="figure align-center"> 115 <div class="figure align-center">
109 <img alt="_images/explecoveragegrid_rangeADCP2.png" src="_images/explecoveragegrid_rangeADCP2.png" /> 116 <img alt="_images/explecoveragegrid_rangeADCP2.png" src="_images/explecoveragegrid_rangeADCP2.png" />
110 </div> 117 </div>
111 -<p>For each of these grid point (in cyan in the figure), we compute the azimuth the the site coordinates and we extract the radial velocity (total) and its components (zonal and meridional).</p>  
112 -<p>We store all the meaningful parameters into a structure named range.</p> 118 +<p># For each of these grid point (in cyan in the figure), we compute the azimuth the the site coordinates and we extract the radial velocity (total) and its components (zonal and meridional).</p>
  119 +<p>#We store all the meaningful parameters into a structure named range.</p>
113 <p>Results from the whole analysis are stored, for example, under: 120 <p>Results from the whole analysis are stored, for example, under:
114 /run/media/bandma01/SeagateWireless/MEOPAR/Matlab/Analysis/Radial_Comparison/201309/ADCP-PAO/ADCP_PAO_version5adcpCorrected_newcalibrations_v2.mat</p> 121 /run/media/bandma01/SeagateWireless/MEOPAR/Matlab/Analysis/Radial_Comparison/201309/ADCP-PAO/ADCP_PAO_version5adcpCorrected_newcalibrations_v2.mat</p>
115 -<p>[[Fichier:CompsNewCalib_RadialVelo_ADCP_PAO_Sept2013.png|200px|thumb|left|Comparison of radial velocities from ADCP bin 2 and HFR WERA at PAO site September 2013]]</p>  
116 -<p>[[Fichier:orientationPAOSept2013.png|200px|thumb|left|RMS diff and correlation from radial velocities compared betwen ADCP bin 2 and HFR WERA at PAO site September 2013]]</p>  
117 -<p>[[Fichier:ADCPbin2vsPAOSept2013.png|200px|thumb|left|radial velocities from ADCP bin 2 vs HFR WERA at PAO site September 2013 - in red: 48h averages]]]]</p> 122 +<p><strong>RESULTS WITH OLD CALIBRATIONS</strong></p>
  123 +<p>generated with PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m</p>
  124 +<div class="figure align-center">
  125 +<img alt="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_01.png" src="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_01.png" />
  126 +<p class="caption"><em>Comparison of radial velocities from ADCP bin 2 and HFR WERA at PAO site September 2013</em></p>
  127 +</div>
  128 +<div class="figure align-center">
  129 +<img alt="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_02.png" src="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_02.png" />
  130 +</div>
  131 +<div class="figure align-center">
  132 +<img alt="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_03.png" src="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_03.png" />
  133 +</div>
  134 +<div class="figure align-center">
  135 +<img alt="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_04.png" src="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_04.png" />
  136 +</div>
  137 +<div class="figure align-center">
  138 +<img alt="_images/Plot_WERA_direction_Sept2013_ADCP_oldcalib_03.png" src="_images/Plot_WERA_direction_Sept2013_ADCP_oldcalib_03.png" />
  139 +</div>
  140 +<p><strong>RESULTS WITH NEW CALIBRATIONS</strong></p>
  141 +<p>generated with PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m</p>
  142 +<div class="figure align-center">
  143 +<img alt="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_01.png" src="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_01.png" />
  144 +</div>
  145 +<div class="figure align-center">
  146 +<img alt="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_02.png" src="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_02.png" />
  147 +</div>
  148 +<div class="figure align-center">
  149 +<img alt="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_03.png" src="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_03.png" />
  150 +</div>
  151 +<div class="figure align-center">
  152 +<img alt="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_04.png" src="_images/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_04.png" />
  153 +</div>
  154 +<div class="figure align-center">
  155 +<img alt="_images/Plot_WERA_direction_Sept2013_ADCP_newcalib_03.png" src="_images/Plot_WERA_direction_Sept2013_ADCP_newcalib_03.png" />
  156 +<p class="caption"><em>RMS diff and correlation from radial velocities compared betwen 1/ ADCP bin 2 and HFR WERA at PAO site September 2013 (HFR grid point closest to ADCP location) and 2/ using model data at ADCP location and at HFR grid point closest to ADCP</em></p>
  157 +</div>
118 </div> 158 </div>
119 159
120 160
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build/html/_sources/Comparison_WERA-ADCP_Sept2013.txt
@@ -10,7 +10,7 @@ Steps of the algorithm: @@ -10,7 +10,7 @@ Steps of the algorithm:
10 .. figure:: figures/sites.png 10 .. figure:: figures/sites.png
11 :align: center 11 :align: center
12 12
13 - location of HFRs domain in the St Lawrence estuary 13 + *location of HFRs domain in the St Lawrence estuary*
14 14
15 2- we load the bathymetry and the HFR sites'coordinates 15 2- we load the bathymetry and the HFR sites'coordinates
16 16
@@ -45,29 +45,23 @@ Steps of the algorithm: @@ -45,29 +45,23 @@ Steps of the algorithm:
45 .. figure:: figures/explecoveragegridallpoint.png 45 .. figure:: figures/explecoveragegridallpoint.png
46 :align: center 46 :align: center
47 47
48 -  
49 -  
50 -  
51 -  
52 .. figure:: figures/Radial_ADCPbin2_HFR_PAO_version5_Sept2013.png 48 .. figure:: figures/Radial_ADCPbin2_HFR_PAO_version5_Sept2013.png
53 :align: center 49 :align: center
54 50
55 - Hourly radial currents from ADCP bin 2 and HFR WERA at PAO - September 2013  
56 -  
57 - Superimposed are the 48-h averages 51 + *Hourly radial currents from ADCP bin 2 and HFR WERA at PAO - September 2013 - superimposed are the 48-h averages*
58 52
59 53
60 -.. [Fichier:Exple_allgridpt.png]] [[Fichier:Gridwithnan.png]]  
61 -  
62 -  
63 - We then look for the HFR grid point nearest the ADCP position at the time of interest. 54 + * We then look for the HFR grid point nearest the ADCP position at the time of interest.
64 55
65 .. figure:: figures/explecoveragegrid2.png 56 .. figure:: figures/explecoveragegrid2.png
66 :align: center 57 :align: center
67 58
68 - We find the HFR Radial velocity at this position and project it onto zonal and meridional components. 59 + *example of grid coverage*
  60 +
  61 +
  62 + * We find the HFR Radial velocity at this position and project it onto zonal and meridional components.
69 63
70 - We store all the meaningful parameters into a structure named radar. 64 + * We store all the meaningful parameters into a structure named radar.
71 65
72 66
73 This analysis allows us to compare radial velocity components from each HFR site with the ADCP components. 67 This analysis allows us to compare radial velocity components from each HFR site with the ADCP components.
@@ -78,7 +72,7 @@ HFR direction @@ -78,7 +72,7 @@ HFR direction
78 72
79 To verify that the HFR looks in the right direction: 73 To verify that the HFR looks in the right direction:
80 74
81 -For each time step of the time period of interest, we compute the distance from the HFR site to each grid point. We select the grid points that are at the same range from the HFR site than the grid point closest to the ADCP. 75 +# For each time step of the time period of interest, we compute the distance from the HFR site to each grid point. We select the grid points that are at the same range from the HFR site than the grid point closest to the ADCP.
82 76
83 .. figure:: figures/explecoveragegrid_rangeADCP.png 77 .. figure:: figures/explecoveragegrid_rangeADCP.png
84 :align: center 78 :align: center
@@ -87,19 +81,56 @@ For each time step of the time period of interest, we compute the distance from @@ -87,19 +81,56 @@ For each time step of the time period of interest, we compute the distance from
87 :align: center 81 :align: center
88 82
89 83
90 -For each of these grid point (in cyan in the figure), we compute the azimuth the the site coordinates and we extract the radial velocity (total) and its components (zonal and meridional). 84 +# For each of these grid point (in cyan in the figure), we compute the azimuth the the site coordinates and we extract the radial velocity (total) and its components (zonal and meridional).
  85 +
  86 +#We store all the meaningful parameters into a structure named range.
91 87
92 -We store all the meaningful parameters into a structure named range.  
93 88
94 Results from the whole analysis are stored, for example, under: 89 Results from the whole analysis are stored, for example, under:
95 /run/media/bandma01/SeagateWireless/MEOPAR/Matlab/Analysis/Radial_Comparison/201309/ADCP-PAO/ADCP_PAO_version5adcpCorrected_newcalibrations_v2.mat 90 /run/media/bandma01/SeagateWireless/MEOPAR/Matlab/Analysis/Radial_Comparison/201309/ADCP-PAO/ADCP_PAO_version5adcpCorrected_newcalibrations_v2.mat
96 91
  92 +**RESULTS WITH OLD CALIBRATIONS**
  93 +
  94 +generated with PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m
  95 +
  96 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_01.png
  97 + :align: center
  98 +
  99 + *Comparison of radial velocities from ADCP bin 2 and HFR WERA at PAO site September 2013*
  100 +
97 101
98 -[[Fichier:CompsNewCalib_RadialVelo_ADCP_PAO_Sept2013.png|200px|thumb|left|Comparison of radial velocities from ADCP bin 2 and HFR WERA at PAO site September 2013]] 102 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_02.png
  103 + :align: center
99 104
  105 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_03.png
  106 + :align: center
  107 +
  108 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_04.png
  109 + :align: center
  110 +
  111 +.. figure:: figures/radialvelocities/Plot_WERA_direction_Sept2013_ADCP_oldcalib_03.png
  112 + :align: center
  113 +
  114 +**RESULTS WITH NEW CALIBRATIONS**
  115 +
  116 +generated with PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m
  117 +
  118 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_01.png
  119 + :align: center
  120 +
  121 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_02.png
  122 + :align: center
  123 +
  124 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_03.png
  125 + :align: center
  126 +
  127 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_04.png
  128 + :align: center
  129 +
  130 +.. figure:: figures/radialvelocities/Plot_WERA_direction_Sept2013_ADCP_newcalib_03.png
  131 + :align: center
100 132
101 -[[Fichier:orientationPAOSept2013.png|200px|thumb|left|RMS diff and correlation from radial velocities compared betwen ADCP bin 2 and HFR WERA at PAO site September 2013]] 133 + *RMS diff and correlation from radial velocities compared betwen 1/ ADCP bin 2 and HFR WERA at PAO site September 2013 (HFR grid point closest to ADCP location) and 2/ using model data at ADCP location and at HFR grid point closest to ADCP*
102 134
103 135
104 -[[Fichier:ADCPbin2vsPAOSept2013.png|200px|thumb|left|radial velocities from ADCP bin 2 vs HFR WERA at PAO site September 2013 - in red: 48h averages]]]]  
105 136
build/html/_sources/dailylog.txt
@@ -75,6 +75,7 @@ reprocess calibrations with new, corrected phases: @@ -75,6 +75,7 @@ reprocess calibrations with new, corrected phases:
75 75
76 76
77 **29 OCT 2015:** 77 **29 OCT 2015:**
  78 +
78 - work on figures of WERA PAO generated with new phases. 79 - work on figures of WERA PAO generated with new phases.
79 - realise there is a problem with new calibration output files: they are the same as with the old calibrations... 80 - realise there is a problem with new calibration output files: they are the same as with the old calibrations...
80 - investigate on wera server if possible mistake in shell scripts 81 - investigate on wera server if possible mistake in shell scripts
@@ -82,20 +83,32 @@ reprocess calibrations with new, corrected phases: @@ -82,20 +83,32 @@ reprocess calibrations with new, corrected phases:
82 - work on MEOPAR HQP section for NCE renewal application 83 - work on MEOPAR HQP section for NCE renewal application
83 84
84 **2 NOV 2015:** 85 **2 NOV 2015:**
  86 +
85 - work on pb with new phases PAO: check shell scripts on WERA serveur 87 - work on pb with new phases PAO: check shell scripts on WERA serveur
86 - try with 1 day (2013244): seems ok 88 - try with 1 day (2013244): seems ok
87 - process by hand each day: ./do_postprocess_SORT_newCalib.sh -s PAO -y 2013273 89 - process by hand each day: ./do_postprocess_SORT_newCalib.sh -s PAO -y 2013273
88 90
89 **3 NOV 2015:** 91 **3 NOV 2015:**
  92 +
90 - finish analysis by hand: take .SORT and output .crad_pol_lst 93 - finish analysis by hand: take .SORT and output .crad_pol_lst
91 => do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO 94 => do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO
92 95
93 **5 NOV 2015:** 96 **5 NOV 2015:**
  97 +
94 - ftp transfer of .crad_pol_lst to local hard Drive 98 - ftp transfer of .crad_pol_lst to local hard Drive
95 => ./do_filetransferssh.sh 2013245 2013273 99 => ./do_filetransferssh.sh 2013245 2013273
96 rsync -v -e ssh wera@132.215.11.14:~/data1/PAO/${JOUR}/results/new/*.crad_pol_lst /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/optimisationPAO/version5_PAO_old_nofullcal/checkNewCalib/ 100 rsync -v -e ssh wera@132.215.11.14:~/data1/PAO/${JOUR}/results/new/*.crad_pol_lst /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/optimisationPAO/version5_PAO_old_nofullcal/checkNewCalib/
97 - use radiallst2uv.m 101 - use radiallst2uv.m
98 102
99 -**the new phases are so closed to the old ones that there isn't any real differences in the radial currents** 103 +**the new phases are so close to the old ones that there isn't any real differences in the radial currents**
  104 +
  105 +
  106 +**16 Nov 2015:**
  107 +
  108 +- work on HFR WERA direction
  109 +
  110 +**17 Nov 2015:**
  111 +
  112 +- generate PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m for old and new calibrations (PAO)
100 113
101 114
build/html/dailylog.html
@@ -180,27 +180,49 @@ @@ -180,27 +180,49 @@
180 </dl> 180 </dl>
181 <p>3- WERA PAO: convert lst files to .mat for new calibrations using radiallst2uv.m 181 <p>3- WERA PAO: convert lst files to .mat for new calibrations using radiallst2uv.m
182 - use RadialVeloCompa_Sept2013_HFR_ADCP_WERA_ADCPcorrected_v2.m to generate new .mat data and use PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m to generate new plots.</p> 182 - use RadialVeloCompa_Sept2013_HFR_ADCP_WERA_ADCPcorrected_v2.m to generate new .mat data and use PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m to generate new plots.</p>
183 -<p><strong>29 OCT 2015:</strong>  
184 -- work on figures of WERA PAO generated with new phases.  
185 -- realise there is a problem with new calibration output files: they are the same as with the old calibrations...  
186 -- investigate on wera server if possible mistake in shell scripts  
187 -- transfer with ssh of old calibrations results  
188 -- work on MEOPAR HQP section for NCE renewal application</p>  
189 -<p><strong>2 NOV 2015:</strong>  
190 -- work on pb with new phases PAO: check shell scripts on WERA serveur  
191 -- try with 1 day (2013244): seems ok  
192 -- process by hand each day: ./do_postprocess_SORT_newCalib.sh -s PAO -y 2013273</p>  
193 -<p><strong>3 NOV 2015:</strong>  
194 -- finish analysis by hand: take .SORT and output .crad_pol_lst</p>  
195 -<blockquote>  
196 -<div>=&gt; do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO</div></blockquote>  
197 -<p><strong>5 NOV 2015:</strong>  
198 -- ftp transfer of .crad_pol_lst to local hard Drive</p>  
199 -<blockquote>  
200 -<div>=&gt; ./do_filetransferssh.sh 2013245 2013273</div></blockquote> 183 +<p><strong>29 OCT 2015:</strong></p>
  184 +<ul class="simple">
  185 +<li>work on figures of WERA PAO generated with new phases.</li>
  186 +<li>realise there is a problem with new calibration output files: they are the same as with the old calibrations...</li>
  187 +<li>investigate on wera server if possible mistake in shell scripts</li>
  188 +<li>transfer with ssh of old calibrations results</li>
  189 +<li>work on MEOPAR HQP section for NCE renewal application</li>
  190 +</ul>
  191 +<p><strong>2 NOV 2015:</strong></p>
  192 +<ul class="simple">
  193 +<li>work on pb with new phases PAO: check shell scripts on WERA serveur</li>
  194 +<li>try with 1 day (2013244): seems ok</li>
  195 +<li>process by hand each day: ./do_postprocess_SORT_newCalib.sh -s PAO -y 2013273</li>
  196 +</ul>
  197 +<p><strong>3 NOV 2015:</strong></p>
  198 +<ul>
  199 +<li><dl class="first docutils">
  200 +<dt>finish analysis by hand: take .SORT and output .crad_pol_lst</dt>
  201 +<dd><p class="first last">=&gt; do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO</p>
  202 +</dd>
  203 +</dl>
  204 +</li>
  205 +</ul>
  206 +<p><strong>5 NOV 2015:</strong></p>
  207 +<ul>
  208 +<li><dl class="first docutils">
  209 +<dt>ftp transfer of .crad_pol_lst to local hard Drive</dt>
  210 +<dd><p class="first last">=&gt; ./do_filetransferssh.sh 2013245 2013273</p>
  211 +</dd>
  212 +</dl>
  213 +</li>
  214 +</ul>
201 <p>rsync -v -e ssh <a class="reference external" href="mailto:wera&#37;&#52;&#48;132&#46;215&#46;11&#46;14">wera<span>&#64;</span>132<span>&#46;</span>215<span>&#46;</span>11<span>&#46;</span>14</a>:~/data1/PAO/${JOUR}/results/new/<a href="#id1"><span class="problematic" id="id2">*</span></a>.crad_pol_lst /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/optimisationPAO/version5_PAO_old_nofullcal/checkNewCalib/ 215 <p>rsync -v -e ssh <a class="reference external" href="mailto:wera&#37;&#52;&#48;132&#46;215&#46;11&#46;14">wera<span>&#64;</span>132<span>&#46;</span>215<span>&#46;</span>11<span>&#46;</span>14</a>:~/data1/PAO/${JOUR}/results/new/<a href="#id1"><span class="problematic" id="id2">*</span></a>.crad_pol_lst /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/optimisationPAO/version5_PAO_old_nofullcal/checkNewCalib/
202 - use radiallst2uv.m</p> 216 - use radiallst2uv.m</p>
203 -<p><strong>the new phases are so closed to the old ones that there isn&#8217;t any real differences in the radial currents</strong></p> 217 +<p><strong>the new phases are so close to the old ones that there isn&#8217;t any real differences in the radial currents</strong></p>
  218 +<p><strong>16 Nov 2015:</strong></p>
  219 +<ul class="simple">
  220 +<li>work on HFR WERA direction</li>
  221 +</ul>
  222 +<p><strong>17 Nov 2015:</strong></p>
  223 +<ul class="simple">
  224 +<li>generate PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m for old and new calibrations (PAO)</li>
  225 +</ul>
204 </div> 226 </div>
205 227
206 228
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3 \ No newline at end of file 3 \ No newline at end of file
source/Comparison_WERA-ADCP_Sept2013.rst
@@ -10,7 +10,7 @@ Steps of the algorithm: @@ -10,7 +10,7 @@ Steps of the algorithm:
10 .. figure:: figures/sites.png 10 .. figure:: figures/sites.png
11 :align: center 11 :align: center
12 12
13 - location of HFRs domain in the St Lawrence estuary 13 + *location of HFRs domain in the St Lawrence estuary*
14 14
15 2- we load the bathymetry and the HFR sites'coordinates 15 2- we load the bathymetry and the HFR sites'coordinates
16 16
@@ -45,29 +45,23 @@ Steps of the algorithm: @@ -45,29 +45,23 @@ Steps of the algorithm:
45 .. figure:: figures/explecoveragegridallpoint.png 45 .. figure:: figures/explecoveragegridallpoint.png
46 :align: center 46 :align: center
47 47
48 -  
49 -  
50 -  
51 -  
52 .. figure:: figures/Radial_ADCPbin2_HFR_PAO_version5_Sept2013.png 48 .. figure:: figures/Radial_ADCPbin2_HFR_PAO_version5_Sept2013.png
53 :align: center 49 :align: center
54 50
55 - Hourly radial currents from ADCP bin 2 and HFR WERA at PAO - September 2013  
56 -  
57 - Superimposed are the 48-h averages 51 + *Hourly radial currents from ADCP bin 2 and HFR WERA at PAO - September 2013 - superimposed are the 48-h averages*
58 52
59 53
60 -.. [Fichier:Exple_allgridpt.png]] [[Fichier:Gridwithnan.png]]  
61 -  
62 -  
63 - We then look for the HFR grid point nearest the ADCP position at the time of interest. 54 + * We then look for the HFR grid point nearest the ADCP position at the time of interest.
64 55
65 .. figure:: figures/explecoveragegrid2.png 56 .. figure:: figures/explecoveragegrid2.png
66 :align: center 57 :align: center
67 58
68 - We find the HFR Radial velocity at this position and project it onto zonal and meridional components. 59 + *example of grid coverage*
  60 +
  61 +
  62 + * We find the HFR Radial velocity at this position and project it onto zonal and meridional components.
69 63
70 - We store all the meaningful parameters into a structure named radar. 64 + * We store all the meaningful parameters into a structure named radar.
71 65
72 66
73 This analysis allows us to compare radial velocity components from each HFR site with the ADCP components. 67 This analysis allows us to compare radial velocity components from each HFR site with the ADCP components.
@@ -78,7 +72,7 @@ HFR direction @@ -78,7 +72,7 @@ HFR direction
78 72
79 To verify that the HFR looks in the right direction: 73 To verify that the HFR looks in the right direction:
80 74
81 -For each time step of the time period of interest, we compute the distance from the HFR site to each grid point. We select the grid points that are at the same range from the HFR site than the grid point closest to the ADCP. 75 +# For each time step of the time period of interest, we compute the distance from the HFR site to each grid point. We select the grid points that are at the same range from the HFR site than the grid point closest to the ADCP.
82 76
83 .. figure:: figures/explecoveragegrid_rangeADCP.png 77 .. figure:: figures/explecoveragegrid_rangeADCP.png
84 :align: center 78 :align: center
@@ -87,19 +81,56 @@ For each time step of the time period of interest, we compute the distance from @@ -87,19 +81,56 @@ For each time step of the time period of interest, we compute the distance from
87 :align: center 81 :align: center
88 82
89 83
90 -For each of these grid point (in cyan in the figure), we compute the azimuth the the site coordinates and we extract the radial velocity (total) and its components (zonal and meridional). 84 +# For each of these grid point (in cyan in the figure), we compute the azimuth the the site coordinates and we extract the radial velocity (total) and its components (zonal and meridional).
  85 +
  86 +#We store all the meaningful parameters into a structure named range.
91 87
92 -We store all the meaningful parameters into a structure named range.  
93 88
94 Results from the whole analysis are stored, for example, under: 89 Results from the whole analysis are stored, for example, under:
95 /run/media/bandma01/SeagateWireless/MEOPAR/Matlab/Analysis/Radial_Comparison/201309/ADCP-PAO/ADCP_PAO_version5adcpCorrected_newcalibrations_v2.mat 90 /run/media/bandma01/SeagateWireless/MEOPAR/Matlab/Analysis/Radial_Comparison/201309/ADCP-PAO/ADCP_PAO_version5adcpCorrected_newcalibrations_v2.mat
96 91
  92 +**RESULTS WITH OLD CALIBRATIONS**
  93 +
  94 +generated with PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m
  95 +
  96 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_01.png
  97 + :align: center
  98 +
  99 + *Comparison of radial velocities from ADCP bin 2 and HFR WERA at PAO site September 2013*
  100 +
97 101
98 -[[Fichier:CompsNewCalib_RadialVelo_ADCP_PAO_Sept2013.png|200px|thumb|left|Comparison of radial velocities from ADCP bin 2 and HFR WERA at PAO site September 2013]] 102 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_02.png
  103 + :align: center
99 104
  105 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_03.png
  106 + :align: center
  107 +
  108 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_04.png
  109 + :align: center
  110 +
  111 +.. figure:: figures/radialvelocities/Plot_WERA_direction_Sept2013_ADCP_oldcalib_03.png
  112 + :align: center
  113 +
  114 +**RESULTS WITH NEW CALIBRATIONS**
  115 +
  116 +generated with PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m
  117 +
  118 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_01.png
  119 + :align: center
  120 +
  121 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_02.png
  122 + :align: center
  123 +
  124 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_03.png
  125 + :align: center
  126 +
  127 +.. figure:: figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_newcalib_04.png
  128 + :align: center
  129 +
  130 +.. figure:: figures/radialvelocities/Plot_WERA_direction_Sept2013_ADCP_newcalib_03.png
  131 + :align: center
100 132
101 -[[Fichier:orientationPAOSept2013.png|200px|thumb|left|RMS diff and correlation from radial velocities compared betwen ADCP bin 2 and HFR WERA at PAO site September 2013]] 133 + *RMS diff and correlation from radial velocities compared betwen 1/ ADCP bin 2 and HFR WERA at PAO site September 2013 (HFR grid point closest to ADCP location) and 2/ using model data at ADCP location and at HFR grid point closest to ADCP*
102 134
103 135
104 -[[Fichier:ADCPbin2vsPAOSept2013.png|200px|thumb|left|radial velocities from ADCP bin 2 vs HFR WERA at PAO site September 2013 - in red: 48h averages]]]]  
105 136
source/dailylog.rst
@@ -75,6 +75,7 @@ reprocess calibrations with new, corrected phases: @@ -75,6 +75,7 @@ reprocess calibrations with new, corrected phases:
75 75
76 76
77 **29 OCT 2015:** 77 **29 OCT 2015:**
  78 +
78 - work on figures of WERA PAO generated with new phases. 79 - work on figures of WERA PAO generated with new phases.
79 - realise there is a problem with new calibration output files: they are the same as with the old calibrations... 80 - realise there is a problem with new calibration output files: they are the same as with the old calibrations...
80 - investigate on wera server if possible mistake in shell scripts 81 - investigate on wera server if possible mistake in shell scripts
@@ -82,20 +83,32 @@ reprocess calibrations with new, corrected phases: @@ -82,20 +83,32 @@ reprocess calibrations with new, corrected phases:
82 - work on MEOPAR HQP section for NCE renewal application 83 - work on MEOPAR HQP section for NCE renewal application
83 84
84 **2 NOV 2015:** 85 **2 NOV 2015:**
  86 +
85 - work on pb with new phases PAO: check shell scripts on WERA serveur 87 - work on pb with new phases PAO: check shell scripts on WERA serveur
86 - try with 1 day (2013244): seems ok 88 - try with 1 day (2013244): seems ok
87 - process by hand each day: ./do_postprocess_SORT_newCalib.sh -s PAO -y 2013273 89 - process by hand each day: ./do_postprocess_SORT_newCalib.sh -s PAO -y 2013273
88 90
89 **3 NOV 2015:** 91 **3 NOV 2015:**
  92 +
90 - finish analysis by hand: take .SORT and output .crad_pol_lst 93 - finish analysis by hand: take .SORT and output .crad_pol_lst
91 => do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO 94 => do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO
92 95
93 **5 NOV 2015:** 96 **5 NOV 2015:**
  97 +
94 - ftp transfer of .crad_pol_lst to local hard Drive 98 - ftp transfer of .crad_pol_lst to local hard Drive
95 => ./do_filetransferssh.sh 2013245 2013273 99 => ./do_filetransferssh.sh 2013245 2013273
96 rsync -v -e ssh wera@132.215.11.14:~/data1/PAO/${JOUR}/results/new/*.crad_pol_lst /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/optimisationPAO/version5_PAO_old_nofullcal/checkNewCalib/ 100 rsync -v -e ssh wera@132.215.11.14:~/data1/PAO/${JOUR}/results/new/*.crad_pol_lst /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/optimisationPAO/version5_PAO_old_nofullcal/checkNewCalib/
97 - use radiallst2uv.m 101 - use radiallst2uv.m
98 102
99 -**the new phases are so closed to the old ones that there isn't any real differences in the radial currents** 103 +**the new phases are so close to the old ones that there isn't any real differences in the radial currents**
  104 +
  105 +
  106 +**16 Nov 2015:**
  107 +
  108 +- work on HFR WERA direction
  109 +
  110 +**17 Nov 2015:**
  111 +
  112 +- generate PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m for old and new calibrations (PAO)
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source/figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_01.png 0 → 100644

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source/figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_02.png 0 → 100644

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source/figures/radialvelocities/PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2_oldcalib_03.png 0 → 100644

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source/figures/radialvelocities/Plot_WERA_direction_Sept2013_ADCP_newcalib_03.png 0 → 100644

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