Commit 121292c784c732286008db0c0fdaef446326c064

Authored by Marion Bandet
1 parent a52e8119
Exists in master

reprocess PAO with new corrected phasese

build/doctrees/dailylog.doctree
No preview for this file type
build/doctrees/environment.pickle
No preview for this file type
build/doctrees/index.doctree
No preview for this file type
build/html/_sources/dailylog.txt
  1 +Log Work Marion
  2 +****************
  3 +
  4 +
1 **19 OCT 2015:** 5 **19 OCT 2015:**
2 6
3 - IBM data management request (IBMassessment.odf) 7 - IBM data management request (IBMassessment.odf)
4 - regenerate new calibration_pao_29OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO 8 - regenerate new calibration_pao_29OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO
5 - regenerate new calibration_pab_30OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB 9 - regenerate new calibration_pab_30OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB
6 - transfer files via ssh to WERA srv: 10 - transfer files via ssh to WERA srv:
7 -  
8 - * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera wera@132.215.11.14:~/etc/  
9 - * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera wera@132.215.11.14:~/etc/ 11 + * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera wera@132.215.11.14:~/etc/
  12 + * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera wera@132.215.11.14:~/etc/
10 13
11 14
12 **20 OCT 2015:** 15 **20 OCT 2015:**
@@ -14,66 +17,67 @@ @@ -14,66 +17,67 @@
14 reprocess calibrations with new, corrected phases: 17 reprocess calibrations with new, corrected phases:
15 18
16 - log onto wera server 19 - log onto wera server
  20 +- cd data1/PAO/
17 - create a directory 2013244_bkp to run test 21 - create a directory 2013244_bkp to run test
18 - rsync -aud 2013244/ 2013244_bkp/ 22 - rsync -aud 2013244/ 2013244_bkp/
19 - cd 2013244 23 - cd 2013244
20 -- what to do?  
21 -  
22 - * cd /home/wera/bin  
23 - * vi do_postprocess_SORT_newCalib.sh  
24 - 24 +- what to do?
  25 + * cd /home/wera/bin
  26 + * vi do_postprocess_SORT_newCalib.sh
25 => add lines 89 nd 90 rm .SORT, rm .RFI 27 => add lines 89 nd 90 rm .SORT, rm .RFI
26 -  
27 - * wera_new_calibration.sh 28 + * wera_new_calibration.sh
28 => comment lines 28-32 (mv .SORT to SORT0 and .RFI to .RFI0) 29 => comment lines 28-32 (mv .SORT to SORT0 and .RFI to .RFI0)
29 -  
30 - try on 2013244: > bash -x do_postprocess_SORT_newCalib -s PAO -y 2013244 30 - try on 2013244: > bash -x do_postprocess_SORT_newCalib -s PAO -y 2013244
31 - to process more than one day at a time, use:> bash -x Process_TimePeriod_wera.sh -s PAO -d 2013245 -f 2013273 31 - to process more than one day at a time, use:> bash -x Process_TimePeriod_wera.sh -s PAO -d 2013245 -f 2013273
32 -  
33 - files transfer (PAO) using shell script in /home/wera/bin: do_filetransferssh.sh 32 - files transfer (PAO) using shell script in /home/wera/bin: do_filetransferssh.sh
34 33
35 34
36 **21 OCT 2015:** 35 **21 OCT 2015:**
37 36
38 -After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:  
39 -  
40 -do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO 37 +- After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:
  38 + do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO
41 39
42 - work on a shell to find out if we have data in the "raw" directories 40 - work on a shell to find out if we have data in the "raw" directories
43 - ./checkDataSize.sh 2012347 2012365  
44 - ./checkDataSize.sh 2013001 2013365  
45 - ./checkDataSize.sh 2014001 2014365  
46 -all logged in ~/data1/PAO/RAWfileSize.log 41 + * ./checkDataSize.sh 2012347 2012365
  42 + * ./checkDataSize.sh 2013001 2013365
  43 + * ./checkDataSize.sh 2014001 2014365
  44 +
  45 + all logged in ~/data1/PAO/RAWfileSize.log
47 46
48 47
49 **27 OCT 2015:** 48 **27 OCT 2015:**
50 49
51 -- write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m) 50 +- write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)
52 - run same script on wera server for PAB (same dates) 51 - run same script on wera server for PAB (same dates)
53 - modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100. 52 - modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100.
54 -/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth 53 + * /Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth
55 - reprocesser CODAR PAP1 pour 10 mai 2013 with: 54 - reprocesser CODAR PAP1 pour 10 mai 2013 with:
56 -  
57 - * cd hfr-data-processing/postprocessing/codar/  
58 - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10 55 + * cd hfr-data-processing/postprocessing/codar/
  56 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10
59 57
60 58
61 **28 OCT 2015:** 59 **28 OCT 2015:**
62 60
63 -1- reprocesser CODAR PAP1 pour 11 mai 2013  
64 -  
65 - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11 61 +1- reprocess CODAR PAP1 for May 11, 2013
66 62
  63 +- ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11
67 - modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100. 64 - modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100.
68 -/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth 65 + * /Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth
69 - reprocesser CODAR STF2 pour 10 mai 2013 66 - reprocesser CODAR STF2 pour 10 mai 2013
70 - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10  
71 - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11  
72 - 67 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10
  68 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11
73 69
74 2- reprocesser WERA PAB pour september 2013 avec nouvelles phases 70 2- reprocesser WERA PAB pour september 2013 avec nouvelles phases
75 => no data at this time 71 => no data at this time
76 72
  73 +3- WERA PAO: convert lst files to .mat for new calibrations using radiallst2uv.m
  74 +- use RadialVeloCompa_Sept2013_HFR_ADCP_WERA_ADCPcorrected_v2.m to generate new .mat data and use PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m to generate new plots.
  75 +
77 76
78 - 77 +**29 OCT 2015:**
  78 +- work on figures of WERA PAO generated with new phases.
  79 +- realise there is a problem with new calibration output files: they are the same as with the old calibrations...
  80 +- investigate on wera server if possible mistake in shell scripts
  81 +- transfer with ssh of old calibrations results
  82 +- work on MEOPAR HQP section for NCE renewal application
79 83
build/html/_sources/index.txt
@@ -43,3 +43,11 @@ Below are the field experiments used to conduct comparisons between HFR and buoy @@ -43,3 +43,11 @@ Below are the field experiments used to conduct comparisons between HFR and buoy
43 20130830 43 20130830
44 20140506 44 20140506
45 45
  46 +Log Work Marion
  47 +----------------
  48 +
  49 +.. toctree::
  50 + :maxdepth: 2
  51 +
  52 + dailylog.rst
  53 +
build/html/dailylog.html
@@ -6,7 +6,7 @@ @@ -6,7 +6,7 @@
6 <head> 6 <head>
7 <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> 7 <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
8 8
9 - <title>&lt;no title&gt; &mdash; documentation_HFR_analysis 0.0.1 documentation</title> 9 + <title>Log Work Marion &mdash; documentation_HFR_analysis 0.0.1 documentation</title>
10 10
11 <link rel="stylesheet" href="_static/default.css" type="text/css" /> 11 <link rel="stylesheet" href="_static/default.css" type="text/css" />
12 <link rel="stylesheet" href="_static/pygments.css" type="text/css" /> 12 <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
@@ -23,7 +23,8 @@ @@ -23,7 +23,8 @@
23 <script type="text/javascript" src="_static/jquery.js"></script> 23 <script type="text/javascript" src="_static/jquery.js"></script>
24 <script type="text/javascript" src="_static/underscore.js"></script> 24 <script type="text/javascript" src="_static/underscore.js"></script>
25 <script type="text/javascript" src="_static/doctools.js"></script> 25 <script type="text/javascript" src="_static/doctools.js"></script>
26 - <link rel="top" title="documentation_HFR_analysis 0.0.1 documentation" href="index.html" /> 26 + <link rel="top" title="documentation_HFR_analysis 0.0.1 documentation" href="index.html" />
  27 + <link rel="prev" title="Experiment on May 06, 2014" href="20140506.html" />
27 </head> 28 </head>
28 <body> 29 <body>
29 <div class="related"> 30 <div class="related">
@@ -32,6 +33,9 @@ @@ -32,6 +33,9 @@
32 <li class="right" style="margin-right: 10px"> 33 <li class="right" style="margin-right: 10px">
33 <a href="genindex.html" title="General Index" 34 <a href="genindex.html" title="General Index"
34 accesskey="I">index</a></li> 35 accesskey="I">index</a></li>
  36 + <li class="right" >
  37 + <a href="20140506.html" title="Experiment on May 06, 2014"
  38 + accesskey="P">previous</a> |</li>
35 <li><a href="index.html">documentation_HFR_analysis 0.0.1 documentation</a> &raquo;</li> 39 <li><a href="index.html">documentation_HFR_analysis 0.0.1 documentation</a> &raquo;</li>
36 </ul> 40 </ul>
37 </div> 41 </div>
@@ -41,7 +45,9 @@ @@ -41,7 +45,9 @@
41 <div class="bodywrapper"> 45 <div class="bodywrapper">
42 <div class="body"> 46 <div class="body">
43 47
44 - <p><strong>19 OCT 2015:</strong></p> 48 + <div class="section" id="log-work-marion">
  49 +<h1>Log Work Marion<a class="headerlink" href="#log-work-marion" title="Permalink to this headline">¶</a></h1>
  50 +<p><strong>19 OCT 2015:</strong></p>
45 <ul> 51 <ul>
46 <li><p class="first">IBM data management request (IBMassessment.odf)</p> 52 <li><p class="first">IBM data management request (IBMassessment.odf)</p>
47 </li> 53 </li>
@@ -49,13 +55,14 @@ @@ -49,13 +55,14 @@
49 </li> 55 </li>
50 <li><p class="first">regenerate new calibration_pab_30OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB</p> 56 <li><p class="first">regenerate new calibration_pab_30OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB</p>
51 </li> 57 </li>
52 -<li><p class="first">transfer files via ssh to WERA srv:</p>  
53 -<blockquote>  
54 -<div><ul class="simple"> 58 +<li><dl class="first docutils">
  59 +<dt>transfer files via ssh to WERA srv:</dt>
  60 +<dd><ul class="first last simple">
55 <li>rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera <a class="reference external" href="mailto:wera&#37;&#52;&#48;132&#46;215&#46;11&#46;14">wera<span>&#64;</span>132<span>&#46;</span>215<span>&#46;</span>11<span>&#46;</span>14</a>:~/etc/</li> 61 <li>rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera <a class="reference external" href="mailto:wera&#37;&#52;&#48;132&#46;215&#46;11&#46;14">wera<span>&#64;</span>132<span>&#46;</span>215<span>&#46;</span>11<span>&#46;</span>14</a>:~/etc/</li>
56 <li>rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera <a class="reference external" href="mailto:wera&#37;&#52;&#48;132&#46;215&#46;11&#46;14">wera<span>&#64;</span>132<span>&#46;</span>215<span>&#46;</span>11<span>&#46;</span>14</a>:~/etc/</li> 62 <li>rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera <a class="reference external" href="mailto:wera&#37;&#52;&#48;132&#46;215&#46;11&#46;14">wera<span>&#64;</span>132<span>&#46;</span>215<span>&#46;</span>11<span>&#46;</span>14</a>:~/etc/</li>
57 </ul> 63 </ul>
58 -</div></blockquote> 64 +</dd>
  65 +</dl>
59 </li> 66 </li>
60 </ul> 67 </ul>
61 <p><strong>20 OCT 2015:</strong></p> 68 <p><strong>20 OCT 2015:</strong></p>
@@ -63,21 +70,24 @@ @@ -63,21 +70,24 @@
63 <ul> 70 <ul>
64 <li><p class="first">log onto wera server</p> 71 <li><p class="first">log onto wera server</p>
65 </li> 72 </li>
  73 +<li><p class="first">cd data1/PAO/</p>
  74 +</li>
66 <li><p class="first">create a directory 2013244_bkp to run test</p> 75 <li><p class="first">create a directory 2013244_bkp to run test</p>
67 </li> 76 </li>
68 <li><p class="first">rsync -aud 2013244/ 2013244_bkp/</p> 77 <li><p class="first">rsync -aud 2013244/ 2013244_bkp/</p>
69 </li> 78 </li>
70 <li><p class="first">cd 2013244</p> 79 <li><p class="first">cd 2013244</p>
71 </li> 80 </li>
72 -<li><p class="first">what to do?</p>  
73 -<blockquote>  
74 -<div><ul> 81 +<li><dl class="first docutils">
  82 +<dt>what to do?</dt>
  83 +<dd><ul class="first last">
75 <li><p class="first">cd /home/wera/bin</p> 84 <li><p class="first">cd /home/wera/bin</p>
76 </li> 85 </li>
77 -<li><p class="first">vi do_postprocess_SORT_newCalib.sh</p>  
78 -<blockquote>  
79 -<div><p>=&gt; add lines 89 nd 90 rm .SORT, rm .RFI</p>  
80 -</div></blockquote> 86 +<li><dl class="first docutils">
  87 +<dt>vi do_postprocess_SORT_newCalib.sh</dt>
  88 +<dd><p class="first last">=&gt; add lines 89 nd 90 rm .SORT, rm .RFI</p>
  89 +</dd>
  90 +</dl>
81 </li> 91 </li>
82 <li><dl class="first docutils"> 92 <li><dl class="first docutils">
83 <dt>wera_new_calibration.sh</dt> 93 <dt>wera_new_calibration.sh</dt>
@@ -86,7 +96,8 @@ @@ -86,7 +96,8 @@
86 </dl> 96 </dl>
87 </li> 97 </li>
88 </ul> 98 </ul>
89 -</div></blockquote> 99 +</dd>
  100 +</dl>
90 </li> 101 </li>
91 <li><p class="first">try on 2013244: &gt; bash -x do_postprocess_SORT_newCalib -s PAO -y 2013244</p> 102 <li><p class="first">try on 2013244: &gt; bash -x do_postprocess_SORT_newCalib -s PAO -y 2013244</p>
92 </li> 103 </li>
@@ -96,52 +107,86 @@ @@ -96,52 +107,86 @@
96 </li> 107 </li>
97 </ul> 108 </ul>
98 <p><strong>21 OCT 2015:</strong></p> 109 <p><strong>21 OCT 2015:</strong></p>
99 -<p>After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:</p>  
100 -<p>do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO</p>  
101 -<ul class="simple">  
102 -<li>work on a shell to find out if we have data in the &#8220;raw&#8221; directories</li> 110 +<ul>
  111 +<li><dl class="first docutils">
  112 +<dt>After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:</dt>
  113 +<dd><p class="first last">do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO</p>
  114 +</dd>
  115 +</dl>
  116 +</li>
  117 +<li><dl class="first docutils">
  118 +<dt>work on a shell to find out if we have data in the &#8220;raw&#8221; directories</dt>
  119 +<dd><ul class="first last simple">
  120 +<li>./checkDataSize.sh 2012347 2012365</li>
  121 +<li>./checkDataSize.sh 2013001 2013365</li>
  122 +<li>./checkDataSize.sh 2014001 2014365</li>
  123 +</ul>
  124 +</dd>
  125 +</dl>
  126 +</li>
103 </ul> 127 </ul>
104 <blockquote> 128 <blockquote>
105 -<div>./checkDataSize.sh 2012347 2012365  
106 -./checkDataSize.sh 2013001 2013365  
107 -./checkDataSize.sh 2014001 2014365</div></blockquote>  
108 -<p>all logged in ~/data1/PAO/RAWfileSize.log</p> 129 +<div>all logged in ~/data1/PAO/RAWfileSize.log</div></blockquote>
109 <p><strong>27 OCT 2015:</strong></p> 130 <p><strong>27 OCT 2015:</strong></p>
110 -<ul class="simple">  
111 -<li>write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)</li>  
112 -<li>run same script on wera server for PAB (same dates)</li>  
113 -<li>modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100.</li> 131 +<ul>
  132 +<li><p class="first">write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)</p>
  133 +</li>
  134 +<li><p class="first">run same script on wera server for PAB (same dates)</p>
  135 +</li>
  136 +<li><dl class="first docutils">
  137 +<dt>modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100.</dt>
  138 +<dd><ul class="first last simple">
  139 +<li>/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth</li>
114 </ul> 140 </ul>
115 -<p>/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth  
116 -- reprocesser CODAR PAP1 pour 10 mai 2013 with:</p>  
117 -<blockquote>  
118 -<div><ul class="simple"> 141 +</dd>
  142 +</dl>
  143 +</li>
  144 +<li><dl class="first docutils">
  145 +<dt>reprocesser CODAR PAP1 pour 10 mai 2013 with:</dt>
  146 +<dd><ul class="first last simple">
119 <li>cd hfr-data-processing/postprocessing/codar/</li> 147 <li>cd hfr-data-processing/postprocessing/codar/</li>
120 <li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10</li> 148 <li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10</li>
121 </ul> 149 </ul>
122 -</div></blockquote>  
123 -<p><strong>28 OCT 2015:</strong></p>  
124 -<p>1- reprocesser CODAR PAP1 pour 11 mai 2013</p>  
125 -<blockquote>  
126 -<div><ul class="simple">  
127 -<li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11</li> 150 +</dd>
  151 +</dl>
  152 +</li>
128 </ul> 153 </ul>
129 -</div></blockquote>  
130 -<ul class="simple">  
131 -<li>modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100.</li> 154 +<p><strong>28 OCT 2015:</strong></p>
  155 +<p>1- reprocess CODAR PAP1 for May 11, 2013</p>
  156 +<ul>
  157 +<li><p class="first">./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11</p>
  158 +</li>
  159 +<li><dl class="first docutils">
  160 +<dt>modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100.</dt>
  161 +<dd><ul class="first last simple">
  162 +<li>/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth</li>
132 </ul> 163 </ul>
133 -<p>/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth  
134 -- reprocesser CODAR STF2 pour 10 mai 2013</p>  
135 -<blockquote>  
136 -<div><ul class="simple"> 164 +</dd>
  165 +</dl>
  166 +</li>
  167 +<li><dl class="first docutils">
  168 +<dt>reprocesser CODAR STF2 pour 10 mai 2013</dt>
  169 +<dd><ul class="first last simple">
137 <li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10</li> 170 <li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10</li>
138 <li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11</li> 171 <li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11</li>
139 </ul> 172 </ul>
140 -</div></blockquote> 173 +</dd>
  174 +</dl>
  175 +</li>
  176 +</ul>
141 <dl class="docutils"> 177 <dl class="docutils">
142 <dt>2- reprocesser WERA PAB pour september 2013 avec nouvelles phases</dt> 178 <dt>2- reprocesser WERA PAB pour september 2013 avec nouvelles phases</dt>
143 <dd>=&gt; no data at this time</dd> 179 <dd>=&gt; no data at this time</dd>
144 </dl> 180 </dl>
  181 +<p>3- WERA PAO: convert lst files to .mat for new calibrations using radiallst2uv.m
  182 +- use RadialVeloCompa_Sept2013_HFR_ADCP_WERA_ADCPcorrected_v2.m to generate new .mat data and use PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m to generate new plots.</p>
  183 +<p><strong>29 OCT 2015:</strong>
  184 +- work on figures of WERA PAO generated with new phases.
  185 +- realise there is a problem with new calibration output files: they are the same as with the old calibrations...
  186 +- investigate on wera server if possible mistake in shell scripts
  187 +- transfer with ssh of old calibrations results
  188 +- work on MEOPAR HQP section for NCE renewal application</p>
  189 +</div>
145 190
146 191
147 </div> 192 </div>
@@ -149,6 +194,9 @@ @@ -149,6 +194,9 @@
149 </div> 194 </div>
150 <div class="sphinxsidebar"> 195 <div class="sphinxsidebar">
151 <div class="sphinxsidebarwrapper"> 196 <div class="sphinxsidebarwrapper">
  197 + <h4>Previous topic</h4>
  198 + <p class="topless"><a href="20140506.html"
  199 + title="previous chapter">Experiment on May 06, 2014</a></p>
152 <h3>This Page</h3> 200 <h3>This Page</h3>
153 <ul class="this-page-menu"> 201 <ul class="this-page-menu">
154 <li><a href="_sources/dailylog.txt" 202 <li><a href="_sources/dailylog.txt"
@@ -177,6 +225,9 @@ @@ -177,6 +225,9 @@
177 <li class="right" style="margin-right: 10px"> 225 <li class="right" style="margin-right: 10px">
178 <a href="genindex.html" title="General Index" 226 <a href="genindex.html" title="General Index"
179 >index</a></li> 227 >index</a></li>
  228 + <li class="right" >
  229 + <a href="20140506.html" title="Experiment on May 06, 2014"
  230 + >previous</a> |</li>
180 <li><a href="index.html">documentation_HFR_analysis 0.0.1 documentation</a> &raquo;</li> 231 <li><a href="index.html">documentation_HFR_analysis 0.0.1 documentation</a> &raquo;</li>
181 </ul> 232 </ul>
182 </div> 233 </div>
build/html/index.html
@@ -113,6 +113,14 @@ @@ -113,6 +113,14 @@
113 </ul> 113 </ul>
114 </div> 114 </div>
115 </div> 115 </div>
  116 +<div class="section" id="log-work-marion">
  117 +<h2>Log Work Marion<a class="headerlink" href="#log-work-marion" title="Permalink to this headline">¶</a></h2>
  118 +<div class="toctree-wrapper compound">
  119 +<ul>
  120 +<li class="toctree-l1"><a class="reference internal" href="dailylog.html">Log Work Marion</a></li>
  121 +</ul>
  122 +</div>
  123 +</div>
116 </div> 124 </div>
117 125
118 126
@@ -126,6 +134,7 @@ @@ -126,6 +134,7 @@
126 <li><a class="reference internal" href="#">Welcome to the documentation of High Frequency Radars (CODAR and WERA)</a><ul> 134 <li><a class="reference internal" href="#">Welcome to the documentation of High Frequency Radars (CODAR and WERA)</a><ul>
127 <li><a class="reference internal" href="#postprocessing">Postprocessing</a></li> 135 <li><a class="reference internal" href="#postprocessing">Postprocessing</a></li>
128 <li><a class="reference internal" href="#experiments">Experiments</a></li> 136 <li><a class="reference internal" href="#experiments">Experiments</a></li>
  137 +<li><a class="reference internal" href="#log-work-marion">Log Work Marion</a></li>
129 </ul> 138 </ul>
130 </li> 139 </li>
131 </ul> 140 </ul>
build/html/searchindex.js
1 -Search.setIndex({envversion:42,terms:{all:[0,14,10,3,6],reprocess:[10,6],month:6,correl:0,marion:[],follow:[14,3],disk:14,paperposit:[],row:[],content:[14,6],misread:6,middl:[],demet:[],aud:10,rst_checkweraposit:[],program:6,matlab:[0,3,6],under:[0,6],aux:[],time_calib:[],unzip:3,everi:[7,3,6],wera_antennacoord_txt2mat:6,far:12,projet:3,print:[],configuration_:[],volum:[14,10],spectratoprocess:14,octob:[8,15],cyan:0,tri:3,hour:[7,3],hfrmat:3,modify_wera_sort:6,"try":10,measpattern:14,datapresence_log2mat:10,datenum:[],"2min34sec":[],dir:[],pleas:6,direct:[],crop:[],past:14,download:[7,3],"_submesoscal":[],click:6,odf:10,index:0,what:[14,10,3,6],compar:[0,12,6],section:1,advanc:14,abl:6,cell:[],hourli:[0,3,6],conduct:[],"new":7,can:[14,6],codar2:14,codar1:14,gener:7,lon_mid:[],here:[0,6],water:9,accur:12,let:6,modifi:10,legend:[],valu:6,"200px":0,search:[],survei:12,datevec:[],idealpattern:14,precis:[],hfr_data_process:3,permit:6,chang:[14,6],pierr:[],via:[0,3,10],theta_pair:[],pap1_css_:14,appli:6,approxim:3,"_ascii":7,"3e8":[],apm:6,marker:[],instal:[8,15],should:[7,6],fig_h:[],select:0,plot:10,from:7,pere:[],two:6,websit:3,music:[14,6],seasonderadialsetup:6,postprocess:[],taken:6,stage:3,rad2tot:3,more:[1,10],sort:[10,7,6],flamentpab_track_30:6,ylabel:[],flag:14,phases_:[],hold:[],sw_dist:[],retriev:14,ibm:10,currentscombin:[],analys:[],setup:14,work:[1,10,3,6],pour:10,cat:6,whatev:[],deg:14,heur:7,ruv2mat:3,want:6,download_codar_rt:3,str2doubl:[],surfac:0,zonal:0,end:[],radial_comparison:0,"r\u00e9sultats_cedric_outardes_2014_avec_latlon":12,check_up:[],newcalibr:7,write:10,radialvelocompa_sept2013_hfr_adcp_wera_adcpcorrected_v2:0,uqar:[1,7,14,10],verifi:0,csv:3,config:[14,10],updat:6,regener:10,mat:[0,7,3,14,6],dataconvers:10,after:[0,14,10],spot:9,diagram:[14,6],befor:[0,14],wrong:6,meopar:[0,1,10,7,6],attent:14,date:[10,7,6],data:[],averag:[0,3,6],youwish:[],"2013244_bkp":10,confus:[],spectra:14,correspond:0,element:[],inform:[],shore:[8,15],allow:0,cs4:14,lambda:[],order:[9,6],oper:6,move:[14,3],meter:[],lst:7,same:[0,10],estuari:[8,9,15],nombr:[],paramet:[0,14],thumb:0,hfr_lsle_20150817t170000z:3,iml:0,late:[],lonlat2km:[],wrt:[],onc:14,lsle:[7,9],main:1,isdir:[],them:6,"return":[],thei:[],dan:10,dai:[14,15,10,7,6],initi:[],systm:[],"break":[],now:[],term:6,name:0,separ:[],februari:[8,15],each:[0,3,6,7,9,15],found:[7,6],reprocess_ogsl_hfr_treat:3,xlp:[14,6],fig_hdl:[],crontab:3,year:7,wavelength:[],extract:0,orient:0,out:10,variabl:[],"3rd":6,open:[14,6],research:[],categori:[],vector:0,calib:[],helzelpab_track_30:6,calib_fil:[],correct:10,red:0,fig_w:[],bathymetri:0,given:[0,6],gridwithnan_adcp:0,org:7,"byte":[],bash:10,care:14,angl:0,unwant:[],keep:[],filter:[14,6],caption:[],length:[],avec:10,radialconfigs_stf2_20130206_bapm_music402002_nosmooth:[10,6],onto:[0,10],south:8,first:6,origin:[14,6],softwar:6,rang:0,do_process_sort_pol:[10,7,6],ibmassess:10,currentshfrwithaverageexport:3,arrai:15,number:[],system:[7,3],compsnewcalib_radialvelo_adcp_pao_sept2013:0,lat:[],done:6,lat_mid:[],miss:14,size:10,differ:6,script:[0,7,10,3,6],checkdatas:10,sometim:14,spectraseri:14,saint:9,gpx:6,store:[0,14,6],shell:[7,10,3,6],travail:3,option:[],season:[],calib_hr:[],copi:[14,3,6],specifi:[0,6],part:1,than:[0,7,10],png:0,center:[],stf:[14,3],provid:3,remov:[14,6],delta_phase_th:[],structur:0,project:[0,1],xlabel:[],were:[9,6],posit:[],minut:[0,3,6],toward:[],submesoscal:6,seri:[],latitud:[],hfr:[],comput:[0,3],adcp_pao_version5adcpcorrected_newcalibrations_v2:0,julian:[7,6],radial:[],ant:[],raw:[10,7,6],"20d":14,have:[8,6,14,12,7,10,15],need:[14,6],ismer:1,calib_min:[],min:3,centimet:[],superimpos:[0,6],note:6,also:14,ideal:14,gps_data:[],take:6,which:6,transmit:[8,15],data1:[10,7,6],juli:[8,15],data2:7,sure:14,track:6,calibration_pao_29oct2014:[10,6],seasond:[14,10],marin:1,ogsl_hfr_treat:3,deploi:9,phase:14,everyth:14,lancertraitementspectracodar:10,radiallst2uv:7,do_filetransferssh:[10,6],clear:[],request:10,doe:[14,3],azimuth:0,left:0,radial2uv:14,calib_year:[],gps_gpx2mat:6,filetransferssh:6,find:[0,1,10,7,6],fichier:0,onli:[0,14],locat:[7,10,3,6],calibration_pao:6,phasedifference_:[],calibration_pab:6,dispers:1,theme:[],analyz:0,elseif:[],folder:[14,7,6],u_mean_adcp:0,local:14,oct:[10,6],info:1,calib_tim:[],flament:6,variou:9,get:[0,14],yadcp:0,ssh:[7,3,10],adcp:[],version5_pao_ol_nofullc:7,wera_new_calibr:[10,6],index_timecalib:[],ascii2mat:3,organ:1,helzelpao_track_29:6,mettr:10,common:6,contain:[0,6],rfi:[10,7,6],wiki:6,set:[],incid:[],ftp_transfer:7,matlab_analysi:10,see:6,sec:[],result:[7,3],close:[],"55min":3,best:[],patt:6,rad2deg:[],paocalibr:[],forecast:1,figur:0,between:1,theta:0,betwen:0,"15e6":[],isol:[],currmax:10,southeast:[],extent:7,subfold:7,bodi:[],last:3,delimit:[],helzel:6,umean_adcp_v:0,umean_adcp_u:0,april:[8,7,15],calibration_pab_30oct2014:[10,6],caibrat:[],"15min":0,improv:1,whole:0,load:0,point:[],color:[],css_:14,period:[],walk:6,header:[14,10],drogu:9,diff:0,zeta:[],boat:6,coupl:1,instrument:[9,6],come:14,loggin:[14,7,6],due:6,been:[14,10,12,6],compon:0,much:7,interest:[0,14],ddsit:[],txt:[14,10,12,6],download_wera_rt:3,delet:14,imag:[],radialconfig:[14,10,6],convert:[7,3,6],dpng:[],coordin:[0,12,6],togeth:3,calib_valu:[],"_calibr":[],look:[0,6],"_pair":[],"while":6,observ:3,loop:[14,6],"c\u00f4te":15,metric:6,site:[7,3,14],archiv:[14,3],calibrationpao:6,calibrationpab:6,ascii:3,rfi0:[10,6],pap:[14,3],modifcurrmax:10,etc:[10,6],receiv:[8,15,12],media:[0,10,7,6],make:[0,14],belong:6,sqrt:[],pab:[7,3],meridion:0,northwest:[],meopar_marion:10,num2str:[],fill:14,pao:[7,3],phi:[],http:3,webserv:3,closest:0,patt_pap1_2012_12_15:6,sort0:[10,6],radialconfigs_pap1_20130201_bapm_music402002_20dsmooth:14,php:[],lower:[8,9,15],appropri:14,kept:3,hfr_process:3,well:6,exampl:[0,14,7,6],thi:[0,1,3,6,9,10],choos:0,undertaken:6,model:1,bandet:[],usual:0,comment:10,distanc:0,identifi:7,ddist:[],calibr:[],dyndn:7,wee:[],had:9,theoret:[],desktop:14,fortran:6,add:[14,10],lawrenc:[8,9,15],els:[],save:[14,6],modul:[],bin:[0,10,7,6],march:[14,8,15,6],fname:[],format:3,phasang:[],uncheck:14,grid:[0,3],know:6,process_timeperiod_wera:10,paperunit:[],measur:[14,12],"_rx_coord":[],like:[],hfrdata:3,rangeadcp:0,spectraprocess:14,server:[7,10,3,14,6],collect:6,either:0,output:7,page:[1,6],r500:[],www:3,right:0,old:[],codarprocess:[],"1st":6,back:14,weraphase_txt2mat:6,sampl:9,home:[7,10,3,6],rsync:[7,10],total:[0,3],outard:[],dlmwrite:[],markerfacecolor:[],avoid:[],"2014_10":6,per:7,seagatewireless:[0,10,7,6],estim:0,larg:6,outil:6,refer:6,run:[0,3,6,14,7,10],accueil:[],june:[8,15],rawfiles:10,delta_r:[],modsym:[],step:[],januari:[8,15],ruv:[14,3],"20132440000_pao":0,simpler:7,comparison:[],about:1,nanmean:[],bandma01:[0,10,7,6],column:[9,6],codar_wera_ogsl:3,strcmp:[],degre:[0,6],srv:[3,10],nord:15,mean:0,routin:[3,6],figdir:[],within:0,automat:[14,6],compos:[8,15],assess:10,pair:[],vr_adcp_proj:0,weather:[],phasecalibration_:[],your:[],manag:10,pabcalibr:[],span:[],log:[3,10],transfer:[14,10,6],lon:[],transform:[14,6],changenam:6,avail:[0,3,6],start:[14,8,15,6],call:6,r_mid:[],north:15,link:6,yyyyjjj:7,do_postprocess_sort_newcalib:[10,6],line:[14,10],adcpbin2vspaosept2013:0,patt_pap1_2014_01_14_1154_nosmooth:14,codardata:[14,10],made:[],save_flag:[],smooth:[14,6],displai:3,until:6,delta_phase_ob:[],record:6,below:1,sum:[],crad_pol_lst:[7,10],"export":3,radialconfigs_pap1_20130201_bapm_music402002_nosmooth:[14,10,6],creat:[14,10,6],"48h":0,"int":[],certain:10,nouvel:10,novemb:[8,15],file:[14,7],pap1:[],check:[],ur_adcp_proj:0,antenna:[14,8],titl:[],nan:[],weraprocess:[],survey_dgps_2012:12,field:[1,12,6],other:1,futur:6,papers:[],test:[8,15,10],you:[1,7,14],trash:14,relat:1,symbol:6,drift:[0,1],meaning:0,dropbox:10,calib_jd:[],xadcp:0,longitud:[],phi_ant:[],nfile:[],algorithm:0,directori:[10,3,6],htdoc:3,orientationpaosept2013:0,buoi:[1,9],depth:9,matfil:3,time:[],decemb:[8,15]},objtypes:{},objnames:{},filenames:["Comparison_WERA-ADCP_Sept2013","index","20130826","CurrentsCombination","20130830","20130515","calibration","WERAprocessing","CODARdata","20140506","dailylog","calibPAB","checkWERAposition","calibPAO","CODARprocessing","WERAdata"],titles:["Comparison WERA and ADCP radial velocities September 2013","Welcome to the documentation of High Frequency Radars (CODAR and WERA)","Experiment on August 26, 2013","Current combination and OGSL data feed","Experiment on August 20, 2013","Experiment on May 15, 2013","Calibrations","WERA radial currents processing","CODAR SYSTEM","Experiment on May 06, 2014","&lt;no title&gt;","Outputs of WERAcalibration.m for PAB site","Checking WERA Rx Antenna&#8217;s position accuracy","Outputs of WERAcalibration.m for PAO site","CODAR radial currents processing","WERA SYSTEM"],objects:{},titleterms:{feed:3,calibr:6,old:6,point:[8,15,6],process:[14,7,6],direct:0,indic:[],high:1,radar:1,boisvert:15,result:[],file:[],tabl:[],pap1:[],check:12,hfr:0,pap:8,now:6,from:6,welcom:1,pere:6,system:[8,15],accuraci:12,current:[7,3,14,6],quasi:[],postprocess:1,conduct:[],weracalibr:[13,11],aux:15,lsle:[],document:1,codar:[1,8,14,6],pao:[13,15],analysi:[],saint:[8,6],august:[2,4],comparison:[0,6],gener:6,object:6,site:[8,13,11,15],step:6,flavi:[8,6],stf2:[],adcp:0,"new":6,phase:6,radialconfigs_stf2_20121220_bapm_music402002_nosmooth:[],post:[],ogsl:3,data:[8,3,15],outard:15,period:[8,15],utc:6,stf:8,experi:[1,2,5,9,4],antenna:12,acquisit:[8,15],frequenc:1,veloc:0,radialconfigs_pap1_20121213_wapm_music402002_5dsmooth:[],list:[],"p\u00e8re":8,documentation_hfr_analysi:[],wera:[0,1,6,7,12,15],combin:3,time:[8,15],mai:[5,9],radial:[0,14,7,6],posit:12,output:[13,11],realtim:[],septemb:0,pab:[11,15]}})  
2 \ No newline at end of file 1 \ No newline at end of file
  2 +Search.setIndex({envversion:42,terms:{all:[0,14,12,3,6],reprocess:[12,6],month:6,correl:0,marion:[],follow:[14,3],disk:14,paperposit:[],row:[],content:[14,6],misread:6,middl:[],demet:[],aud:12,rst_checkweraposit:[],program:6,matlab:[0,3,6],under:[0,6],aux:[],time_calib:[],unzip:3,everi:[7,3,6],wera_antennacoord_txt2mat:6,far:15,projet:3,print:[],configuration_:[],volum:[14,12],spectratoprocess:14,octob:[8,10],cyan:0,tri:3,hour:[7,3],hfrmat:3,modify_wera_sort:6,"try":12,measpattern:14,datapresence_log2mat:12,datenum:[],"2min34sec":[],dir:[],pleas:6,direct:[],crop:[],past:14,download:[7,3],"_submesoscal":[],click:6,odf:12,index:0,what:[14,12,3,6],compar:[0,15,6],section:[1,12],advanc:14,abl:6,cell:[],hourli:[0,3,6],conduct:[],"new":7,can:[14,6],codar2:14,codar1:14,gener:7,lon_mid:[],here:[0,6],water:9,accur:15,let:6,modifi:12,legend:[],valu:6,"200px":0,search:[],survei:15,datevec:[],idealpattern:14,precis:[],hfr_data_process:3,permit:6,chang:[14,6],pierr:[],via:[0,3,12],theta_pair:[],pap1_css_:14,appli:6,approxim:3,"_ascii":7,"3e8":[],apm:6,marker:[],instal:[8,10],total:[0,3],fig_h:[],select:0,plot:12,from:7,pere:[],two:6,websit:3,music:[14,6],seasonderadialsetup:6,postprocess:[],taken:6,stage:3,rad2tot:3,more:[1,12],sort:[12,7,6],flamentpab_track_30:6,ylabel:[],flag:14,phases_:[],hold:[],sw_dist:[],retriev:14,ibm:12,currentscombin:[],analys:[],setup:14,work:[3,6],pour:12,cat:6,whatev:[],deg:14,heur:7,ruv2mat:3,want:6,download_codar_rt:3,str2doubl:[],surfac:0,zonal:0,end:[],radial_comparison:0,"r\u00e9sultats_cedric_outardes_2014_avec_latlon":15,check_up:[],newcalibr:7,length:[],write:12,radialvelocompa_sept2013_hfr_adcp_wera_adcpcorrected_v2:[0,12],uqar:[1,7,14,12],verifi:0,csv:3,config:[14,12],updat:6,regener:12,mat:[0,3,6,14,7,12],dataconvers:12,after:[0,14,12],spot:9,diagram:[14,6],befor:[0,14],wrong:6,meopar:[0,1,12,7,6],attent:14,date:[12,7,6],data:[],averag:[0,3,6],youwish:[],"2013244_bkp":12,confus:[],spectra:14,correspond:0,element:[],inform:[],shore:[8,10],allow:0,cs4:14,lambda:[],order:[9,6],oper:6,move:[14,3],meter:[],lst:[7,12],same:[0,12],estuari:[8,9,10],nombr:[],paramet:[0,14],thumb:0,hfr_lsle_20150817t170000z:3,iml:0,late:[],lonlat2km:[],wrt:[],onc:14,lsle:[7,9],main:1,isdir:[],them:6,"return":[],thei:12,dan:12,dai:[14,10,12,7,6],initi:[],systm:[],"break":[],now:[],term:6,name:0,hqp:12,separ:[],februari:[8,10],each:[0,3,6,7,9,10],found:[7,6],reprocess_ogsl_hfr_treat:3,xlp:[14,6],fig_hdl:[],crontab:3,year:7,wavelength:[],extract:0,orient:0,out:12,variabl:[],"3rd":6,open:[14,6],research:[],categori:[],vector:0,calib:[],helzelpab_track_30:6,calib_fil:[],correct:12,red:0,fig_w:[],bathymetri:0,given:[0,6],gridwithnan_adcp:0,org:7,"byte":[],bash:12,care:14,angl:0,unwant:[],keep:[],filter:[14,6],caption:[],renew:12,avec:12,radialconfigs_stf2_20130206_bapm_music402002_nosmooth:[12,6],onto:[0,12],south:8,first:6,origin:[14,6],softwar:6,rang:0,do_process_sort_pol:[12,7,6],ibmassess:12,currentshfrwithaverageexport:3,arrai:10,number:[],system:[7,3],compsnewcalib_radialvelo_adcp_pao_sept2013:0,lat:[],done:6,lat_mid:[],miss:14,size:12,differ:6,script:[0,7,12,3,6],checkdatas:12,sometim:14,spectraseri:14,saint:9,gpx:6,store:[0,14,6],shell:[7,12,3,6],travail:3,option:[],season:[],calib_hr:[],copi:[14,3,6],specifi:[0,6],part:1,save_flag:[],than:[0,7,12],png:0,center:[],stf:[14,3],provid:3,dispers:1,remov:[14,6],delta_phase_th:[],structur:0,project:[0,1],xlabel:[],were:[9,6],posit:[],minut:[0,3,6],toward:[],submesoscal:6,plotradialvelocompa_sept2013_hfr_adcp_wera_v2:12,seri:[],latitud:[],hfr:[],comput:[0,3],adcp_pao_version5adcpcorrected_newcalibrations_v2:0,julian:[7,6],radial:[],ant:[],raw:[12,7,6],"20d":14,have:[8,6,14,12,7,15,10],need:[14,6],ismer:1,calib_min:[],min:3,centimet:[],superimpos:[0,6],note:6,also:14,ideal:14,gps_data:[],take:6,which:6,transmit:[8,10],data1:[12,7,6],juli:[8,10],data2:7,sure:14,track:6,calibration_pao_29oct2014:[12,6],seasond:[14,12],marin:1,ogsl_hfr_treat:3,deploi:9,phase:14,everyth:14,lancertraitementspectracodar:12,radiallst2uv:[7,12],do_filetransferssh:[12,6],clear:[],request:12,doe:[14,3],azimuth:0,left:0,radial2uv:14,calib_year:[],gps_gpx2mat:6,filetransferssh:6,find:[0,1,12,7,6],fichier:0,onli:[0,14],locat:[7,12,3,6],calibration_pao:6,phasedifference_:[],calibration_pab:6,nce:12,theme:[],analyz:0,elseif:[],folder:[14,7,6],u_mean_adcp:0,local:14,oct:[12,6],info:1,calib_tim:[],flament:6,variou:9,get:[0,14],yadcp:0,ssh:[7,3,12],adcp:[],version5_pao_ol_nofullc:7,wera_new_calibr:[12,6],index_timecalib:[],ascii2mat:3,organ:1,helzelpao_track_29:6,mettr:12,common:6,contain:[0,6],rfi:[12,7,6],wiki:6,set:[],incid:[],ftp_transfer:7,matlab_analysi:12,see:6,sec:[],result:[7,3],close:[],"55min":3,best:[],patt:6,rad2deg:[],paocalibr:[],forecast:1,figur:[0,12],between:1,theta:0,betwen:0,"15e6":[],isol:[],currmax:12,southeast:[],extent:7,subfold:7,bodi:[],last:3,delimit:[],helzel:6,umean_adcp_v:0,umean_adcp_u:0,april:[8,7,10],calibration_pab_30oct2014:[12,6],caibrat:[],"15min":0,improv:1,whole:0,load:0,point:[],color:[],css_:14,period:[],walk:6,header:[14,12],drogu:9,diff:0,zeta:[],boat:6,coupl:1,instrument:[9,6],come:14,loggin:[14,7,6],due:6,been:[14,15,12,6],compon:0,much:7,interest:[0,14],ddsit:[],download_wera_rt:3,delet:14,imag:[],radialconfig:[14,12,6],convert:[7,12,3,6],dpng:[],coordin:[0,15,6],togeth:3,calib_valu:[],"_calibr":[],look:[0,6],"_pair":[],"while":6,observ:3,loop:[14,6],"c\u00f4te":10,metric:6,site:[7,3,14],archiv:[14,3],calibrationpao:6,calibrationpab:6,ascii:3,rfi0:[12,6],pap:[14,3],modifcurrmax:12,etc:[12,6],receiv:[8,10,15],media:[0,12,7,6],make:[0,14],belong:6,sqrt:[],pab:[7,3],meridion:0,northwest:[],meopar_marion:12,num2str:[],fill:14,pao:[7,3],phi:[],http:3,webserv:3,closest:0,patt_pap1_2012_12_15:6,sort0:[12,6],radialconfigs_pap1_20130201_bapm_music402002_20dsmooth:14,php:[],lower:[8,9,10],appropri:14,kept:3,hfr_process:3,well:6,exampl:[0,14,7,6],thi:[0,1,3,6,9,12],choos:0,undertaken:6,model:1,bandet:[],usual:0,comment:12,distanc:0,identifi:7,ddist:[],calibr:[],dyndn:7,wee:[],had:9,theoret:[],desktop:14,fortran:6,add:[14,12],lawrenc:[8,9,10],els:[],save:[14,6],modul:[],bin:[0,12,7,6],applic:12,march:[14,8,10,6],fname:[],format:3,phasang:[],uncheck:14,grid:[0,3],know:6,realis:12,process_timeperiod_wera:12,paperunit:[],measur:[14,15],"_rx_coord":[],like:[],hfrdata:3,rangeadcp:0,should:[7,6],spectraprocess:14,server:[7,12,3,14,6],collect:6,either:0,output:7,page:[1,6],r500:[],www:3,right:0,old:[],codarprocess:[],"1st":6,back:14,weraphase_txt2mat:6,sampl:9,mistak:12,home:[7,12,3,6],rsync:[7,12],txt:[14,15,12,6],outard:[],dlmwrite:[],markerfacecolor:[],avoid:[],"2014_10":6,per:7,seagatewireless:[0,12,7,6],estim:0,larg:6,outil:6,refer:6,investig:12,run:[0,3,6,14,7,12],accueil:[],june:[8,10],rawfiles:12,delta_r:[],modsym:[],step:[],januari:[8,10],ruv:[14,3],"20132440000_pao":0,simpler:7,comparison:[],about:1,nanmean:[],bandma01:[0,12,7,6],column:[9,6],codar_wera_ogsl:3,strcmp:[],degre:[0,6],srv:[3,12],nord:10,mean:0,routin:[3,6],figdir:[],within:0,automat:[14,6],compos:[8,10],assess:12,pair:[],vr_adcp_proj:0,weather:[],phasecalibration_:[],your:[],manag:12,pabcalibr:[],span:[],log:3,transfer:[14,12,6],lon:[],transform:[14,6],changenam:6,avail:[0,3,6],start:[14,8,10,6],call:6,r_mid:[],north:10,link:6,yyyyjjj:7,do_postprocess_sort_newcalib:[12,6],line:[14,12],adcpbin2vspaosept2013:0,patt_pap1_2014_01_14_1154_nosmooth:14,codardata:[14,12],made:[],possibl:12,smooth:[14,6],displai:3,until:6,delta_phase_ob:[],record:6,below:1,sum:[],crad_pol_lst:[7,12],"export":3,problem:12,radialconfigs_pap1_20130201_bapm_music402002_nosmooth:[14,12,6],creat:[14,12,6],"48h":0,"int":[],certain:12,nouvel:12,novemb:[8,10],file:[14,7],pap1:[],check:[],ur_adcp_proj:0,antenna:[14,8],titl:[],nan:[],weraprocess:[],survey_dgps_2012:15,field:[1,15,6],other:1,futur:6,papers:[],test:[8,10,12],you:[1,7,14],trash:14,relat:1,symbol:6,drift:[0,1],meaning:0,dropbox:12,calib_jd:[],xadcp:0,longitud:[],phi_ant:[],nfile:[],algorithm:0,directori:[12,3,6],htdoc:3,orientationpaosept2013:0,buoi:[1,9],depth:9,matfil:3,time:[],decemb:[8,10]},objtypes:{},objnames:{},filenames:["Comparison_WERA-ADCP_Sept2013","index","20130826","CurrentsCombination","20130830","20130515","calibration","WERAprocessing","CODARdata","20140506","WERAdata","calibPAB","dailylog","calibPAO","CODARprocessing","checkWERAposition"],titles:["Comparison WERA and ADCP radial velocities September 2013","Welcome to the documentation of High Frequency Radars (CODAR and WERA)","Experiment on August 26, 2013","Current combination and OGSL data feed","Experiment on August 20, 2013","Experiment on May 15, 2013","Calibrations","WERA radial currents processing","CODAR SYSTEM","Experiment on May 06, 2014","WERA SYSTEM","Outputs of WERAcalibration.m for PAB site","Log Work Marion","Outputs of WERAcalibration.m for PAO site","CODAR radial currents processing","Checking WERA Rx Antenna&#8217;s position accuracy"],objects:{},titleterms:{feed:3,calibr:6,old:6,point:[8,10,6],process:[14,7,6],direct:0,indic:[],high:1,radar:1,boisvert:10,result:[],file:[],tabl:[],work:[1,12],pap1:[],check:15,marion:[1,12],acquisit:[8,10],pap:8,now:6,from:6,welcom:1,pere:6,time:[8,10],system:[8,10],accuraci:15,current:[7,3,14,6],quasi:[],postprocess:1,conduct:[],weracalibr:[13,11],aux:10,lsle:[],document:1,codar:[1,8,14,6],pao:[13,10],analysi:[],saint:[8,6],august:[2,4],comparison:[0,6],gener:6,object:6,site:[8,13,11,10],step:6,flavi:[8,6],stf2:[],adcp:0,"new":6,phase:6,radialconfigs_stf2_20121220_bapm_music402002_nosmooth:[],post:[],ogsl:3,data:[8,3,10],outard:10,period:[8,10],utc:6,stf:8,experi:[1,2,5,9,4],antenna:15,radialconfigs_pap1_20121213_wapm_music402002_5dsmooth:[],frequenc:1,veloc:0,hfr:0,list:[],"p\u00e8re":8,documentation_hfr_analysi:[],wera:[0,1,6,7,15,10],combin:3,log:[1,12],mai:[5,9],radial:[0,14,7,6],posit:15,output:[13,11],realtim:[],septemb:0,bandet:[],daili:[],pab:[11,10]}})
3 \ No newline at end of file 3 \ No newline at end of file
source/dailylog.rst
  1 +Log Work Marion
  2 +****************
  3 +
  4 +
1 **19 OCT 2015:** 5 **19 OCT 2015:**
2 6
3 - IBM data management request (IBMassessment.odf) 7 - IBM data management request (IBMassessment.odf)
4 - regenerate new calibration_pao_29OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO 8 - regenerate new calibration_pao_29OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO
5 - regenerate new calibration_pab_30OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB 9 - regenerate new calibration_pab_30OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB
6 - transfer files via ssh to WERA srv: 10 - transfer files via ssh to WERA srv:
7 -  
8 - * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera wera@132.215.11.14:~/etc/  
9 - * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera wera@132.215.11.14:~/etc/ 11 + * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera wera@132.215.11.14:~/etc/
  12 + * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera wera@132.215.11.14:~/etc/
10 13
11 14
12 **20 OCT 2015:** 15 **20 OCT 2015:**
@@ -14,66 +17,67 @@ @@ -14,66 +17,67 @@
14 reprocess calibrations with new, corrected phases: 17 reprocess calibrations with new, corrected phases:
15 18
16 - log onto wera server 19 - log onto wera server
  20 +- cd data1/PAO/
17 - create a directory 2013244_bkp to run test 21 - create a directory 2013244_bkp to run test
18 - rsync -aud 2013244/ 2013244_bkp/ 22 - rsync -aud 2013244/ 2013244_bkp/
19 - cd 2013244 23 - cd 2013244
20 -- what to do?  
21 -  
22 - * cd /home/wera/bin  
23 - * vi do_postprocess_SORT_newCalib.sh  
24 - 24 +- what to do?
  25 + * cd /home/wera/bin
  26 + * vi do_postprocess_SORT_newCalib.sh
25 => add lines 89 nd 90 rm .SORT, rm .RFI 27 => add lines 89 nd 90 rm .SORT, rm .RFI
26 -  
27 - * wera_new_calibration.sh 28 + * wera_new_calibration.sh
28 => comment lines 28-32 (mv .SORT to SORT0 and .RFI to .RFI0) 29 => comment lines 28-32 (mv .SORT to SORT0 and .RFI to .RFI0)
29 -  
30 - try on 2013244: > bash -x do_postprocess_SORT_newCalib -s PAO -y 2013244 30 - try on 2013244: > bash -x do_postprocess_SORT_newCalib -s PAO -y 2013244
31 - to process more than one day at a time, use:> bash -x Process_TimePeriod_wera.sh -s PAO -d 2013245 -f 2013273 31 - to process more than one day at a time, use:> bash -x Process_TimePeriod_wera.sh -s PAO -d 2013245 -f 2013273
32 -  
33 - files transfer (PAO) using shell script in /home/wera/bin: do_filetransferssh.sh 32 - files transfer (PAO) using shell script in /home/wera/bin: do_filetransferssh.sh
34 33
35 34
36 **21 OCT 2015:** 35 **21 OCT 2015:**
37 36
38 -After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:  
39 -  
40 -do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO 37 +- After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:
  38 + do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO
41 39
42 - work on a shell to find out if we have data in the "raw" directories 40 - work on a shell to find out if we have data in the "raw" directories
43 - ./checkDataSize.sh 2012347 2012365  
44 - ./checkDataSize.sh 2013001 2013365  
45 - ./checkDataSize.sh 2014001 2014365  
46 -all logged in ~/data1/PAO/RAWfileSize.log 41 + * ./checkDataSize.sh 2012347 2012365
  42 + * ./checkDataSize.sh 2013001 2013365
  43 + * ./checkDataSize.sh 2014001 2014365
  44 +
  45 + all logged in ~/data1/PAO/RAWfileSize.log
47 46
48 47
49 **27 OCT 2015:** 48 **27 OCT 2015:**
50 49
51 -- write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m) 50 +- write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)
52 - run same script on wera server for PAB (same dates) 51 - run same script on wera server for PAB (same dates)
53 - modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100. 52 - modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100.
54 -/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth 53 + * /Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth
55 - reprocesser CODAR PAP1 pour 10 mai 2013 with: 54 - reprocesser CODAR PAP1 pour 10 mai 2013 with:
56 -  
57 - * cd hfr-data-processing/postprocessing/codar/  
58 - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10 55 + * cd hfr-data-processing/postprocessing/codar/
  56 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10
59 57
60 58
61 **28 OCT 2015:** 59 **28 OCT 2015:**
62 60
63 -1- reprocesser CODAR PAP1 pour 11 mai 2013  
64 -  
65 - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11 61 +1- reprocess CODAR PAP1 for May 11, 2013
66 62
  63 +- ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11
67 - modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100. 64 - modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100.
68 -/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth 65 + * /Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth
69 - reprocesser CODAR STF2 pour 10 mai 2013 66 - reprocesser CODAR STF2 pour 10 mai 2013
70 - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10  
71 - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11  
72 - 67 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10
  68 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11
73 69
74 2- reprocesser WERA PAB pour september 2013 avec nouvelles phases 70 2- reprocesser WERA PAB pour september 2013 avec nouvelles phases
75 => no data at this time 71 => no data at this time
76 72
  73 +3- WERA PAO: convert lst files to .mat for new calibrations using radiallst2uv.m
  74 +- use RadialVeloCompa_Sept2013_HFR_ADCP_WERA_ADCPcorrected_v2.m to generate new .mat data and use PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m to generate new plots.
  75 +
77 76
78 - 77 +**29 OCT 2015:**
  78 +- work on figures of WERA PAO generated with new phases.
  79 +- realise there is a problem with new calibration output files: they are the same as with the old calibrations...
  80 +- investigate on wera server if possible mistake in shell scripts
  81 +- transfer with ssh of old calibrations results
  82 +- work on MEOPAR HQP section for NCE renewal application
79 83
source/index.rst
@@ -43,3 +43,11 @@ Below are the field experiments used to conduct comparisons between HFR and buoy @@ -43,3 +43,11 @@ Below are the field experiments used to conduct comparisons between HFR and buoy
43 20130830 43 20130830
44 20140506 44 20140506
45 45
  46 +Log Work Marion
  47 +----------------
  48 +
  49 +.. toctree::
  50 + :maxdepth: 2
  51 +
  52 + dailylog.rst
  53 +