Commit 121292c784c732286008db0c0fdaef446326c064

Authored by Marion Bandet
1 parent a52e8119
Exists in master

reprocess PAO with new corrected phasese

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build/html/_sources/dailylog.txt
  1 +Log Work Marion
  2 +****************
  3 +
  4 +
1 5 **19 OCT 2015:**
2 6  
3 7 - IBM data management request (IBMassessment.odf)
4 8 - regenerate new calibration_pao_29OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO
5 9 - regenerate new calibration_pab_30OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB
6 10 - transfer files via ssh to WERA srv:
7   -
8   - * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera wera@132.215.11.14:~/etc/
9   - * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera wera@132.215.11.14:~/etc/
  11 + * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera wera@132.215.11.14:~/etc/
  12 + * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera wera@132.215.11.14:~/etc/
10 13  
11 14  
12 15 **20 OCT 2015:**
... ... @@ -14,66 +17,67 @@
14 17 reprocess calibrations with new, corrected phases:
15 18  
16 19 - log onto wera server
  20 +- cd data1/PAO/
17 21 - create a directory 2013244_bkp to run test
18 22 - rsync -aud 2013244/ 2013244_bkp/
19 23 - cd 2013244
20   -- what to do?
21   -
22   - * cd /home/wera/bin
23   - * vi do_postprocess_SORT_newCalib.sh
24   -
  24 +- what to do?
  25 + * cd /home/wera/bin
  26 + * vi do_postprocess_SORT_newCalib.sh
25 27 => add lines 89 nd 90 rm .SORT, rm .RFI
26   -
27   - * wera_new_calibration.sh
  28 + * wera_new_calibration.sh
28 29 => comment lines 28-32 (mv .SORT to SORT0 and .RFI to .RFI0)
29   -
30 30 - try on 2013244: > bash -x do_postprocess_SORT_newCalib -s PAO -y 2013244
31 31 - to process more than one day at a time, use:> bash -x Process_TimePeriod_wera.sh -s PAO -d 2013245 -f 2013273
32   -
33 32 - files transfer (PAO) using shell script in /home/wera/bin: do_filetransferssh.sh
34 33  
35 34  
36 35 **21 OCT 2015:**
37 36  
38   -After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:
39   -
40   -do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO
  37 +- After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:
  38 + do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO
41 39  
42 40 - work on a shell to find out if we have data in the "raw" directories
43   - ./checkDataSize.sh 2012347 2012365
44   - ./checkDataSize.sh 2013001 2013365
45   - ./checkDataSize.sh 2014001 2014365
46   -all logged in ~/data1/PAO/RAWfileSize.log
  41 + * ./checkDataSize.sh 2012347 2012365
  42 + * ./checkDataSize.sh 2013001 2013365
  43 + * ./checkDataSize.sh 2014001 2014365
  44 +
  45 + all logged in ~/data1/PAO/RAWfileSize.log
47 46  
48 47  
49 48 **27 OCT 2015:**
50 49  
51   -- write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)
  50 +- write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)
52 51 - run same script on wera server for PAB (same dates)
53 52 - modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100.
54   -/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth
  53 + * /Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth
55 54 - reprocesser CODAR PAP1 pour 10 mai 2013 with:
56   -
57   - * cd hfr-data-processing/postprocessing/codar/
58   - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10
  55 + * cd hfr-data-processing/postprocessing/codar/
  56 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10
59 57  
60 58  
61 59 **28 OCT 2015:**
62 60  
63   -1- reprocesser CODAR PAP1 pour 11 mai 2013
64   -
65   - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11
  61 +1- reprocess CODAR PAP1 for May 11, 2013
66 62  
  63 +- ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11
67 64 - modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100.
68   -/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth
  65 + * /Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth
69 66 - reprocesser CODAR STF2 pour 10 mai 2013
70   - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10
71   - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11
72   -
  67 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10
  68 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11
73 69  
74 70 2- reprocesser WERA PAB pour september 2013 avec nouvelles phases
75 71 => no data at this time
76 72  
  73 +3- WERA PAO: convert lst files to .mat for new calibrations using radiallst2uv.m
  74 +- use RadialVeloCompa_Sept2013_HFR_ADCP_WERA_ADCPcorrected_v2.m to generate new .mat data and use PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m to generate new plots.
  75 +
77 76  
78   -
  77 +**29 OCT 2015:**
  78 +- work on figures of WERA PAO generated with new phases.
  79 +- realise there is a problem with new calibration output files: they are the same as with the old calibrations...
  80 +- investigate on wera server if possible mistake in shell scripts
  81 +- transfer with ssh of old calibrations results
  82 +- work on MEOPAR HQP section for NCE renewal application
79 83  
... ...
build/html/_sources/index.txt
... ... @@ -43,3 +43,11 @@ Below are the field experiments used to conduct comparisons between HFR and buoy
43 43 20130830
44 44 20140506
45 45  
  46 +Log Work Marion
  47 +----------------
  48 +
  49 +.. toctree::
  50 + :maxdepth: 2
  51 +
  52 + dailylog.rst
  53 +
... ...
build/html/dailylog.html
... ... @@ -6,7 +6,7 @@
6 6 <head>
7 7 <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
8 8  
9   - <title>&lt;no title&gt; &mdash; documentation_HFR_analysis 0.0.1 documentation</title>
  9 + <title>Log Work Marion &mdash; documentation_HFR_analysis 0.0.1 documentation</title>
10 10  
11 11 <link rel="stylesheet" href="_static/default.css" type="text/css" />
12 12 <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
... ... @@ -23,7 +23,8 @@
23 23 <script type="text/javascript" src="_static/jquery.js"></script>
24 24 <script type="text/javascript" src="_static/underscore.js"></script>
25 25 <script type="text/javascript" src="_static/doctools.js"></script>
26   - <link rel="top" title="documentation_HFR_analysis 0.0.1 documentation" href="index.html" />
  26 + <link rel="top" title="documentation_HFR_analysis 0.0.1 documentation" href="index.html" />
  27 + <link rel="prev" title="Experiment on May 06, 2014" href="20140506.html" />
27 28 </head>
28 29 <body>
29 30 <div class="related">
... ... @@ -32,6 +33,9 @@
32 33 <li class="right" style="margin-right: 10px">
33 34 <a href="genindex.html" title="General Index"
34 35 accesskey="I">index</a></li>
  36 + <li class="right" >
  37 + <a href="20140506.html" title="Experiment on May 06, 2014"
  38 + accesskey="P">previous</a> |</li>
35 39 <li><a href="index.html">documentation_HFR_analysis 0.0.1 documentation</a> &raquo;</li>
36 40 </ul>
37 41 </div>
... ... @@ -41,7 +45,9 @@
41 45 <div class="bodywrapper">
42 46 <div class="body">
43 47  
44   - <p><strong>19 OCT 2015:</strong></p>
  48 + <div class="section" id="log-work-marion">
  49 +<h1>Log Work Marion<a class="headerlink" href="#log-work-marion" title="Permalink to this headline">¶</a></h1>
  50 +<p><strong>19 OCT 2015:</strong></p>
45 51 <ul>
46 52 <li><p class="first">IBM data management request (IBMassessment.odf)</p>
47 53 </li>
... ... @@ -49,13 +55,14 @@
49 55 </li>
50 56 <li><p class="first">regenerate new calibration_pab_30OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB</p>
51 57 </li>
52   -<li><p class="first">transfer files via ssh to WERA srv:</p>
53   -<blockquote>
54   -<div><ul class="simple">
  58 +<li><dl class="first docutils">
  59 +<dt>transfer files via ssh to WERA srv:</dt>
  60 +<dd><ul class="first last simple">
55 61 <li>rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera <a class="reference external" href="mailto:wera&#37;&#52;&#48;132&#46;215&#46;11&#46;14">wera<span>&#64;</span>132<span>&#46;</span>215<span>&#46;</span>11<span>&#46;</span>14</a>:~/etc/</li>
56 62 <li>rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera <a class="reference external" href="mailto:wera&#37;&#52;&#48;132&#46;215&#46;11&#46;14">wera<span>&#64;</span>132<span>&#46;</span>215<span>&#46;</span>11<span>&#46;</span>14</a>:~/etc/</li>
57 63 </ul>
58   -</div></blockquote>
  64 +</dd>
  65 +</dl>
59 66 </li>
60 67 </ul>
61 68 <p><strong>20 OCT 2015:</strong></p>
... ... @@ -63,21 +70,24 @@
63 70 <ul>
64 71 <li><p class="first">log onto wera server</p>
65 72 </li>
  73 +<li><p class="first">cd data1/PAO/</p>
  74 +</li>
66 75 <li><p class="first">create a directory 2013244_bkp to run test</p>
67 76 </li>
68 77 <li><p class="first">rsync -aud 2013244/ 2013244_bkp/</p>
69 78 </li>
70 79 <li><p class="first">cd 2013244</p>
71 80 </li>
72   -<li><p class="first">what to do?</p>
73   -<blockquote>
74   -<div><ul>
  81 +<li><dl class="first docutils">
  82 +<dt>what to do?</dt>
  83 +<dd><ul class="first last">
75 84 <li><p class="first">cd /home/wera/bin</p>
76 85 </li>
77   -<li><p class="first">vi do_postprocess_SORT_newCalib.sh</p>
78   -<blockquote>
79   -<div><p>=&gt; add lines 89 nd 90 rm .SORT, rm .RFI</p>
80   -</div></blockquote>
  86 +<li><dl class="first docutils">
  87 +<dt>vi do_postprocess_SORT_newCalib.sh</dt>
  88 +<dd><p class="first last">=&gt; add lines 89 nd 90 rm .SORT, rm .RFI</p>
  89 +</dd>
  90 +</dl>
81 91 </li>
82 92 <li><dl class="first docutils">
83 93 <dt>wera_new_calibration.sh</dt>
... ... @@ -86,7 +96,8 @@
86 96 </dl>
87 97 </li>
88 98 </ul>
89   -</div></blockquote>
  99 +</dd>
  100 +</dl>
90 101 </li>
91 102 <li><p class="first">try on 2013244: &gt; bash -x do_postprocess_SORT_newCalib -s PAO -y 2013244</p>
92 103 </li>
... ... @@ -96,52 +107,86 @@
96 107 </li>
97 108 </ul>
98 109 <p><strong>21 OCT 2015:</strong></p>
99   -<p>After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:</p>
100   -<p>do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO</p>
101   -<ul class="simple">
102   -<li>work on a shell to find out if we have data in the &#8220;raw&#8221; directories</li>
  110 +<ul>
  111 +<li><dl class="first docutils">
  112 +<dt>After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:</dt>
  113 +<dd><p class="first last">do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO</p>
  114 +</dd>
  115 +</dl>
  116 +</li>
  117 +<li><dl class="first docutils">
  118 +<dt>work on a shell to find out if we have data in the &#8220;raw&#8221; directories</dt>
  119 +<dd><ul class="first last simple">
  120 +<li>./checkDataSize.sh 2012347 2012365</li>
  121 +<li>./checkDataSize.sh 2013001 2013365</li>
  122 +<li>./checkDataSize.sh 2014001 2014365</li>
  123 +</ul>
  124 +</dd>
  125 +</dl>
  126 +</li>
103 127 </ul>
104 128 <blockquote>
105   -<div>./checkDataSize.sh 2012347 2012365
106   -./checkDataSize.sh 2013001 2013365
107   -./checkDataSize.sh 2014001 2014365</div></blockquote>
108   -<p>all logged in ~/data1/PAO/RAWfileSize.log</p>
  129 +<div>all logged in ~/data1/PAO/RAWfileSize.log</div></blockquote>
109 130 <p><strong>27 OCT 2015:</strong></p>
110   -<ul class="simple">
111   -<li>write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)</li>
112   -<li>run same script on wera server for PAB (same dates)</li>
113   -<li>modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100.</li>
  131 +<ul>
  132 +<li><p class="first">write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)</p>
  133 +</li>
  134 +<li><p class="first">run same script on wera server for PAB (same dates)</p>
  135 +</li>
  136 +<li><dl class="first docutils">
  137 +<dt>modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100.</dt>
  138 +<dd><ul class="first last simple">
  139 +<li>/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth</li>
114 140 </ul>
115   -<p>/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth
116   -- reprocesser CODAR PAP1 pour 10 mai 2013 with:</p>
117   -<blockquote>
118   -<div><ul class="simple">
  141 +</dd>
  142 +</dl>
  143 +</li>
  144 +<li><dl class="first docutils">
  145 +<dt>reprocesser CODAR PAP1 pour 10 mai 2013 with:</dt>
  146 +<dd><ul class="first last simple">
119 147 <li>cd hfr-data-processing/postprocessing/codar/</li>
120 148 <li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10</li>
121 149 </ul>
122   -</div></blockquote>
123   -<p><strong>28 OCT 2015:</strong></p>
124   -<p>1- reprocesser CODAR PAP1 pour 11 mai 2013</p>
125   -<blockquote>
126   -<div><ul class="simple">
127   -<li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11</li>
  150 +</dd>
  151 +</dl>
  152 +</li>
128 153 </ul>
129   -</div></blockquote>
130   -<ul class="simple">
131   -<li>modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100.</li>
  154 +<p><strong>28 OCT 2015:</strong></p>
  155 +<p>1- reprocess CODAR PAP1 for May 11, 2013</p>
  156 +<ul>
  157 +<li><p class="first">./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11</p>
  158 +</li>
  159 +<li><dl class="first docutils">
  160 +<dt>modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100.</dt>
  161 +<dd><ul class="first last simple">
  162 +<li>/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth</li>
132 163 </ul>
133   -<p>/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth
134   -- reprocesser CODAR STF2 pour 10 mai 2013</p>
135   -<blockquote>
136   -<div><ul class="simple">
  164 +</dd>
  165 +</dl>
  166 +</li>
  167 +<li><dl class="first docutils">
  168 +<dt>reprocesser CODAR STF2 pour 10 mai 2013</dt>
  169 +<dd><ul class="first last simple">
137 170 <li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10</li>
138 171 <li>./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11</li>
139 172 </ul>
140   -</div></blockquote>
  173 +</dd>
  174 +</dl>
  175 +</li>
  176 +</ul>
141 177 <dl class="docutils">
142 178 <dt>2- reprocesser WERA PAB pour september 2013 avec nouvelles phases</dt>
143 179 <dd>=&gt; no data at this time</dd>
144 180 </dl>
  181 +<p>3- WERA PAO: convert lst files to .mat for new calibrations using radiallst2uv.m
  182 +- use RadialVeloCompa_Sept2013_HFR_ADCP_WERA_ADCPcorrected_v2.m to generate new .mat data and use PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m to generate new plots.</p>
  183 +<p><strong>29 OCT 2015:</strong>
  184 +- work on figures of WERA PAO generated with new phases.
  185 +- realise there is a problem with new calibration output files: they are the same as with the old calibrations...
  186 +- investigate on wera server if possible mistake in shell scripts
  187 +- transfer with ssh of old calibrations results
  188 +- work on MEOPAR HQP section for NCE renewal application</p>
  189 +</div>
145 190  
146 191  
147 192 </div>
... ... @@ -149,6 +194,9 @@
149 194 </div>
150 195 <div class="sphinxsidebar">
151 196 <div class="sphinxsidebarwrapper">
  197 + <h4>Previous topic</h4>
  198 + <p class="topless"><a href="20140506.html"
  199 + title="previous chapter">Experiment on May 06, 2014</a></p>
152 200 <h3>This Page</h3>
153 201 <ul class="this-page-menu">
154 202 <li><a href="_sources/dailylog.txt"
... ... @@ -177,6 +225,9 @@
177 225 <li class="right" style="margin-right: 10px">
178 226 <a href="genindex.html" title="General Index"
179 227 >index</a></li>
  228 + <li class="right" >
  229 + <a href="20140506.html" title="Experiment on May 06, 2014"
  230 + >previous</a> |</li>
180 231 <li><a href="index.html">documentation_HFR_analysis 0.0.1 documentation</a> &raquo;</li>
181 232 </ul>
182 233 </div>
... ...
build/html/index.html
... ... @@ -113,6 +113,14 @@
113 113 </ul>
114 114 </div>
115 115 </div>
  116 +<div class="section" id="log-work-marion">
  117 +<h2>Log Work Marion<a class="headerlink" href="#log-work-marion" title="Permalink to this headline">¶</a></h2>
  118 +<div class="toctree-wrapper compound">
  119 +<ul>
  120 +<li class="toctree-l1"><a class="reference internal" href="dailylog.html">Log Work Marion</a></li>
  121 +</ul>
  122 +</div>
  123 +</div>
116 124 </div>
117 125  
118 126  
... ... @@ -126,6 +134,7 @@
126 134 <li><a class="reference internal" href="#">Welcome to the documentation of High Frequency Radars (CODAR and WERA)</a><ul>
127 135 <li><a class="reference internal" href="#postprocessing">Postprocessing</a></li>
128 136 <li><a class="reference internal" href="#experiments">Experiments</a></li>
  137 +<li><a class="reference internal" href="#log-work-marion">Log Work Marion</a></li>
129 138 </ul>
130 139 </li>
131 140 </ul>
... ...
build/html/searchindex.js
1   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3 3 \ No newline at end of file
... ...
source/dailylog.rst
  1 +Log Work Marion
  2 +****************
  3 +
  4 +
1 5 **19 OCT 2015:**
2 6  
3 7 - IBM data management request (IBMassessment.odf)
4 8 - regenerate new calibration_pao_29OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO
5 9 - regenerate new calibration_pab_30OCT2014.wera located in /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB
6 10 - transfer files via ssh to WERA srv:
7   -
8   - * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera wera@132.215.11.14:~/etc/
9   - * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera wera@132.215.11.14:~/etc/
  11 + * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAB/calibration_pab_30OCT2014.wera wera@132.215.11.14:~/etc/
  12 + * rsync -v -e ssh /run/media/bandma01/SeagateWireless/MEOPAR/DATA/HFRs/WERAs/PAO/calibration_pao_29OCT2014.wera wera@132.215.11.14:~/etc/
10 13  
11 14  
12 15 **20 OCT 2015:**
... ... @@ -14,66 +17,67 @@
14 17 reprocess calibrations with new, corrected phases:
15 18  
16 19 - log onto wera server
  20 +- cd data1/PAO/
17 21 - create a directory 2013244_bkp to run test
18 22 - rsync -aud 2013244/ 2013244_bkp/
19 23 - cd 2013244
20   -- what to do?
21   -
22   - * cd /home/wera/bin
23   - * vi do_postprocess_SORT_newCalib.sh
24   -
  24 +- what to do?
  25 + * cd /home/wera/bin
  26 + * vi do_postprocess_SORT_newCalib.sh
25 27 => add lines 89 nd 90 rm .SORT, rm .RFI
26   -
27   - * wera_new_calibration.sh
  28 + * wera_new_calibration.sh
28 29 => comment lines 28-32 (mv .SORT to SORT0 and .RFI to .RFI0)
29   -
30 30 - try on 2013244: > bash -x do_postprocess_SORT_newCalib -s PAO -y 2013244
31 31 - to process more than one day at a time, use:> bash -x Process_TimePeriod_wera.sh -s PAO -d 2013245 -f 2013273
32   -
33 32 - files transfer (PAO) using shell script in /home/wera/bin: do_filetransferssh.sh
34 33  
35 34  
36 35 **21 OCT 2015:**
37 36  
38   -After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:
39   -
40   -do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO
  37 +- After the new .SORT and .RFI have been generated, we will generate new .crad_pol_lst files with:
  38 + do_process_SORT_pol 2013244 2013273 /home/wera/data1/PAO
41 39  
42 40 - work on a shell to find out if we have data in the "raw" directories
43   - ./checkDataSize.sh 2012347 2012365
44   - ./checkDataSize.sh 2013001 2013365
45   - ./checkDataSize.sh 2014001 2014365
46   -all logged in ~/data1/PAO/RAWfileSize.log
  41 + * ./checkDataSize.sh 2012347 2012365
  42 + * ./checkDataSize.sh 2013001 2013365
  43 + * ./checkDataSize.sh 2014001 2014365
  44 +
  45 + all logged in ~/data1/PAO/RAWfileSize.log
47 46  
48 47  
49 48 **27 OCT 2015:**
50 49  
51   -- write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)
  50 +- write script to plot raw data size vs time to assess if there is data at a certain time period (/home/bandma01/Dropbox/UQAR/MEOPAR_Marion/Matlab_Analysis/dataConversion/DataPresence_log2mat.m)
52 51 - run same script on wera server for PAB (same dates)
53 52 - modifier Header.txt dans RadialConfigs des CODARs (PAP1) pour mettre CurrMax a 100.
54   -/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth
  53 + * /Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth
55 54 - reprocesser CODAR PAP1 pour 10 mai 2013 with:
56   -
57   - * cd hfr-data-processing/postprocessing/codar/
58   - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10
  55 + * cd hfr-data-processing/postprocessing/codar/
  56 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 10
59 57  
60 58  
61 59 **28 OCT 2015:**
62 60  
63   -1- reprocesser CODAR PAP1 pour 11 mai 2013
64   -
65   - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11
  61 +1- reprocess CODAR PAP1 for May 11, 2013
66 62  
  63 +- ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s PAP1 -a 2013 -m 05 -j 11
67 64 - modifier Header.txt dans RadialConfigs des CODARs (STF2) pour mettre CurrMax a 100.
68   -/Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth
  65 + * /Volumes/CodarData/Codar/SeaSonde/Configs/RadialConfigs_STF2_20130206_BAPM_MUSIC402002_nosmooth
69 66 - reprocesser CODAR STF2 pour 10 mai 2013
70   - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10
71   - * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11
72   -
  67 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 10
  68 + * ./lancerTraitementSpectraCodar.sh -n ModifCurrMax -s STF2 -a 2013 -m 05 -j 11
73 69  
74 70 2- reprocesser WERA PAB pour september 2013 avec nouvelles phases
75 71 => no data at this time
76 72  
  73 +3- WERA PAO: convert lst files to .mat for new calibrations using radiallst2uv.m
  74 +- use RadialVeloCompa_Sept2013_HFR_ADCP_WERA_ADCPcorrected_v2.m to generate new .mat data and use PlotRadialVeloCompa_Sept2013_HFR_ADCP_WERA_v2.m to generate new plots.
  75 +
77 76  
78   -
  77 +**29 OCT 2015:**
  78 +- work on figures of WERA PAO generated with new phases.
  79 +- realise there is a problem with new calibration output files: they are the same as with the old calibrations...
  80 +- investigate on wera server if possible mistake in shell scripts
  81 +- transfer with ssh of old calibrations results
  82 +- work on MEOPAR HQP section for NCE renewal application
79 83  
... ...
source/index.rst
... ... @@ -43,3 +43,11 @@ Below are the field experiments used to conduct comparisons between HFR and buoy
43 43 20130830
44 44 20140506
45 45  
  46 +Log Work Marion
  47 +----------------
  48 +
  49 +.. toctree::
  50 + :maxdepth: 2
  51 +
  52 + dailylog.rst
  53 +
... ...