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<p>You have to loggin to the CODAR server at UQAR.</p>
<p>Then follow the directions:</p>
<p>== Check processed data ==
Go to</p>
<p>&#8216;&#8217;&#8216;CodarData/Codar/SeaSonde/Data/Spectra/SpectraProcessed&#8217;&#8216;&#8217;</p>
<ul class="simple">
<li>check that all files have been processed</li>
<li>If ok, remove all file (move to trash)</li>
</ul>
<p>== RadialConfig ==
Go to</p>
<p>&#8216;&#8217;&#8216;CodarData/Codar/SeaSonde/Configs/RadialConfigs&#8217;&#8216;&#8217;</p>
<ul class="simple">
<li>Delete everything</li>
</ul>
<p>Go to (for example)</p>
<p>&#8216;&#8217;&#8216;CodarData/Codar/SeaSonde/Configs/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_nosmooth&#8217;&#8216;&#8217;</p>
<ul class="simple">
<li>Copy the content of the folder into</li>
</ul>
<p>&#8216;&#8217;&#8216;CodarData/Codar/SeaSonde/Configs/RadialConfigs&#8217;&#8216;&#8217;</p>
<div class="section" id="codar-post-processing">
<h1>CODAR post-processing<a class="headerlink" href="#codar-post-processing" title="Permalink to this headline"></a></h1>
<p>== Antenna diagrams for processing ==</p>
<p>Go to</p>
<p>&#8216;&#8217;&#8216;CodarData/Codar/SeaSonde/Data/Loops/ PATT_PAP1_2014_01_14_1154_NoSmooth.xlp&#8217;&#8216;&#8217;</p>
<p>Copy MeasPattern.txt and Phases.txt</p>
<p>Paste in
&#8216;&#8217;&#8216;CodarData/Codar/SeaSonde/Configs/RadialConfigs&#8217;&#8216;&#8217;</p>
<p>Open Header.txt and change line 19 if needed</p>
<p>save. (MUSIC parameters 40 20 2 or 80 40 1)</p>
<p>==&#8217;&#8216;&#8217;ADD-ON Analysis on March 14, 2014&#8217;&#8216;&#8217;==</p>
<p>Go to</p>
<p>&#8216;&#8217;&#8216;CodarData/Codar/SeaSonde/Configs/RadialConfigs&#8217;&#8216;&#8217;</p>
<p>Run “Seasonde Radial Site Setup”.</p>
<p>In “Advanced”, uncheck “filtered and filled” and check “filtered” only.</p>
<p>Save.</p>
<p>Copy the content of the folder RadialConfigs back to the original folder, for example if what is in the “/RadialConfigs” folder comes from “/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_20Dsmooth”, after running the “Seasonde Radial Site Setup”, copy the content of “/RadialConfigs” back to “/RadialConfigs_PAP1_20130201_BAPM_MUSIC402002_20Dsmooth”.</p>
<p>== Spectra ==</p>
<p>Go get spectra on disks (CODAR1 or CODAR2) (on desktop)</p>
<p>Go to (for example)</p>
<p>&#8216;&#8217;&#8216;Codar2/PAP1/Archives/Spectra/&#8217;&#8216;&#8217;</p>
<p>Copy the day(s) we are interested in</p>
<p>(Attention: copy the <a href="#id211"><span class="problematic" id="id212">CSS_</span></a>....cs4 files in <a href="#id213"><span class="problematic" id="id214">PAP1_CSS_</span></a>... folder!!)
and paste in</p>
<p>&#8216;&#8217;&#8216;CodarData/Codar/SeaSonde/Data/Spectra/SpectraToProcess&#8217;&#8216;&#8217;</p>
<p>==&gt; Can also store spectra in</p>
<p>CodarData/Codar/SeaSonde/Data/Spectra/SpectraSeries</p>
<p>Before copy/paste in SpectraToProcess</p>
<p>Once the spectra are in SpectraToProcess, the analysis starts automatically!</p>
<p>ATTENTION: make sure all the files are copied in “SpectraToProcess” sometimes copy-paste does miss files….</p>
<p>== Retrieve processed data ==</p>
<p>Go to</p>
<p>&#8216;&#8217;&#8216;CodarData/Codar/SeaSonde/Data/Radials/&#8217;&#8216;&#8217;</p>
<p>Processed data are in “Filtered”, “IdealPattern” and “MeasPattern” folders.</p>
<p>Save data in appropriate folders (to be created if needs be)</p>
<p>MUSIC 40-20-2
<a href="#id1"><span class="problematic" id="id2">*</span></a>no smoothing
<a href="#id3"><span class="problematic" id="id4">*</span></a>measured no filtered
<a href="#id5"><span class="problematic" id="id6">*</span></a>ideal no filtered
<a href="#id7"><span class="problematic" id="id8">*</span></a>measured filtered
<a href="#id9"><span class="problematic" id="id10">*</span></a>ideal filtered</p>
<p>MUSIC 80-40-1
<a href="#id11"><span class="problematic" id="id12">*</span></a>no smoothing
<a href="#id13"><span class="problematic" id="id14">*</span></a>measured no filtered
<a href="#id15"><span class="problematic" id="id16">*</span></a>ideal no filtered
<a href="#id17"><span class="problematic" id="id18">*</span></a>measured filtered
<a href="#id19"><span class="problematic" id="id20">*</span></a>ideal filtered</p>
<p>MUSIC 40-20-2
<a href="#id21"><span class="problematic" id="id22">*</span></a>20D smoothing
<a href="#id23"><span class="problematic" id="id24">*</span></a>measured no filtered
<a href="#id25"><span class="problematic" id="id26">*</span></a>measured filtered</p>
<p>MUSIC 80-40-1
<a href="#id27"><span class="problematic" id="id28">*</span></a>20D smoothing
<a href="#id29"><span class="problematic" id="id30">*</span></a>measured no filtered
<a href="#id31"><span class="problematic" id="id32">*</span></a>measured filtered</p>
<p>== Transfer data to local disk ==</p>
<p>== Transform .ruv to .mat ==</p>
<p>Using radial2uv.m</p>
<p>Be careful to the flag f.</p>
<p><a href="#id33"><span class="problematic" id="id34">*</span></a>f=0 for not filtered data;
<a href="#id35"><span class="problematic" id="id36">*</span></a>f=1 for filtered data</p>
<p>== CHECK_UP ==</p>
<p>{|
|
|
|
|
<a href="#id37"><span class="problematic" id="id38">|</span></a>PAP
<a href="#id39"><span class="problematic" id="id40">|</span></a>STF
<a href="#id41"><span class="problematic" id="id42">|</span></a>-
<a href="#id43"><span class="problematic" id="id44">|</span></a>1. measured
<a href="#id45"><span class="problematic" id="id46">|</span></a>MUSIC 40-20-2
<a href="#id47"><span class="problematic" id="id48">|</span></a>no smoothing
<a href="#id49"><span class="problematic" id="id50">|</span></a>no filtered
<a href="#id51"><span class="problematic" id="id52">|</span></a>ok
<a href="#id53"><span class="problematic" id="id54">|</span></a>ok
<a href="#id55"><span class="problematic" id="id56">|</span></a>-
<a href="#id57"><span class="problematic" id="id58">|</span></a>2. ideal
<a href="#id59"><span class="problematic" id="id60">|</span></a>MUSIC 40-20-2
<a href="#id61"><span class="problematic" id="id62">|</span></a>no smoothing
<a href="#id63"><span class="problematic" id="id64">|</span></a>no filtered
<a href="#id65"><span class="problematic" id="id66">|</span></a>ok
<a href="#id67"><span class="problematic" id="id68">|</span></a>ok
<a href="#id69"><span class="problematic" id="id70">|</span></a>-
<a href="#id71"><span class="problematic" id="id72">|</span></a>3. measured
<a href="#id73"><span class="problematic" id="id74">|</span></a>MUSIC 40-20-2
<a href="#id75"><span class="problematic" id="id76">|</span></a>no smoothing
<a href="#id77"><span class="problematic" id="id78">|</span></a>filtered
<a href="#id79"><span class="problematic" id="id80">|</span></a>ok
<a href="#id81"><span class="problematic" id="id82">|</span></a>ok
<a href="#id83"><span class="problematic" id="id84">|</span></a>-
<a href="#id85"><span class="problematic" id="id86">|</span></a>4. ideal
<a href="#id87"><span class="problematic" id="id88">|</span></a>MUSIC 40-20-2
<a href="#id89"><span class="problematic" id="id90">|</span></a>no smoothing
<a href="#id91"><span class="problematic" id="id92">|</span></a>filtered
<a href="#id93"><span class="problematic" id="id94">|</span></a>ok
<a href="#id95"><span class="problematic" id="id96">|</span></a>ok
<a href="#id97"><span class="problematic" id="id98">|</span></a>-
<a href="#id99"><span class="problematic" id="id100">|</span></a>5. measured
<a href="#id101"><span class="problematic" id="id102">|</span></a>MUSIC 80-40-1
<a href="#id103"><span class="problematic" id="id104">|</span></a>no smoothing
<a href="#id105"><span class="problematic" id="id106">|</span></a>no filtered
<a href="#id107"><span class="problematic" id="id108">|</span></a>ok
<a href="#id109"><span class="problematic" id="id110">|</span></a>ok
<a href="#id111"><span class="problematic" id="id112">|</span></a>-
<a href="#id113"><span class="problematic" id="id114">|</span></a>6. ideal
<a href="#id115"><span class="problematic" id="id116">|</span></a>MUSIC 80-40-1
<a href="#id117"><span class="problematic" id="id118">|</span></a>no smoothing
<a href="#id119"><span class="problematic" id="id120">|</span></a>no filtered
<a href="#id121"><span class="problematic" id="id122">|</span></a>ok
<a href="#id123"><span class="problematic" id="id124">|</span></a>ok
<a href="#id125"><span class="problematic" id="id126">|</span></a>-
<a href="#id127"><span class="problematic" id="id128">|</span></a>7. measured
<a href="#id129"><span class="problematic" id="id130">|</span></a>MUSIC 80-40-1
<a href="#id131"><span class="problematic" id="id132">|</span></a>no smoothing
<a href="#id133"><span class="problematic" id="id134">|</span></a>filtered
<a href="#id135"><span class="problematic" id="id136">|</span></a>ok
<a href="#id137"><span class="problematic" id="id138">|</span></a>ok
<a href="#id139"><span class="problematic" id="id140">|</span></a>-
<a href="#id141"><span class="problematic" id="id142">|</span></a>8. ideal
<a href="#id143"><span class="problematic" id="id144">|</span></a>MUSIC 80-40-1
<a href="#id145"><span class="problematic" id="id146">|</span></a>no smoothing
<a href="#id147"><span class="problematic" id="id148">|</span></a>filtered
<a href="#id149"><span class="problematic" id="id150">|</span></a>ok
<a href="#id151"><span class="problematic" id="id152">|</span></a>ok
<a href="#id153"><span class="problematic" id="id154">|</span></a>-
<a href="#id155"><span class="problematic" id="id156">|</span></a>9. measured
<a href="#id157"><span class="problematic" id="id158">|</span></a>MUSIC 40-20-2
<a href="#id159"><span class="problematic" id="id160">|</span></a>20D smoothing
<a href="#id161"><span class="problematic" id="id162">|</span></a>no filtered
<a href="#id163"><span class="problematic" id="id164">|</span></a>ok
<a href="#id165"><span class="problematic" id="id166">|</span></a>ok
<a href="#id167"><span class="problematic" id="id168">|</span></a>-
<a href="#id169"><span class="problematic" id="id170">|</span></a>10. measured
<a href="#id171"><span class="problematic" id="id172">|</span></a>MUSIC 40-20-2
<a href="#id173"><span class="problematic" id="id174">|</span></a>20D smoothing
<a href="#id175"><span class="problematic" id="id176">|</span></a>filtered
<a href="#id177"><span class="problematic" id="id178">|</span></a>ok
<a href="#id179"><span class="problematic" id="id180">|</span></a>ok
<a href="#id181"><span class="problematic" id="id182">|</span></a>-
<a href="#id183"><span class="problematic" id="id184">|</span></a>11. measured
<a href="#id185"><span class="problematic" id="id186">|</span></a>MUSIC 80-40-1
<a href="#id187"><span class="problematic" id="id188">|</span></a>20D smoothing
<a href="#id189"><span class="problematic" id="id190">|</span></a>no filtered
<a href="#id191"><span class="problematic" id="id192">|</span></a>ok
<a href="#id193"><span class="problematic" id="id194">|</span></a>ok
<a href="#id195"><span class="problematic" id="id196">|</span></a>-
<a href="#id197"><span class="problematic" id="id198">|</span></a>12. measured
<a href="#id199"><span class="problematic" id="id200">|</span></a>MUSIC 80-40-1
<a href="#id201"><span class="problematic" id="id202">|</span></a>20D smoothing
<a href="#id203"><span class="problematic" id="id204">|</span></a>filtered
<a href="#id205"><span class="problematic" id="id206">|</span></a>ok
<a href="#id207"><span class="problematic" id="id208">|</span></a>ok
<a href="#id209"><span class="problematic" id="id210">|</span></a>}</p>
<p>Modified by Marion Bandet on 2015/07/14</p>
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<h1>Current combination<a class="headerlink" href="#current-combination" title="Permalink to this headline"></a></h1>
<p>Radial currents from WERA and CODAR systems are combined together on a grid to provide total currents approximately every hour.
The processing is conducted on the WERA server (ssh <a class="reference external" href="mailto:wera&#37;&#52;&#48;132&#46;215&#46;11&#46;14">wera<span>&#64;</span>132<span>&#46;</span>215<span>&#46;</span>11<span>&#46;</span>14</a>) and the resulting hourly currents are exported to .csv files to be displayed on he OGSL website (<a class="reference external" href="http://ogsl.ca/observations/">http://ogsl.ca/observations/</a>).</p>
<p>All the matlab scripts are located in ~/projets/hfr_data_processing/hfr_processing.</p>
<p>A crontab runs the analysis (crontab).</p>
<p>The processing runs as follows:</p>
<p>&#8216;&#8217;&#8216;1- download the last available data at WERA sites&#8217;&#8216;&#8217; (radial currents - ascii format)</p>
<p>For PAO, data is available at HH+00 and HH+30</p>
<p>For PAB, data is available at HH+15 et HH+45</p>
<p>Every 10 min the crontab tries to download data via a shell script:</p>
<p>5,15,25,35,45,50 * * * * /home/wera/projets/hfr-data-processing/hfr_process/download_wera_rt.sh</p>
<p>The data is located in: /home/wera/codar_wera_ogsl/archives/data</p>
<p>&#8216;&#8217;&#8216;2- download the last available data at CODAR sites&#8217;&#8216;&#8217; (.ruv)</p>
<p>For PAP and STF, data is available at HH+00</p>
<p>Every 5 minutes, the crontab tries to download data via a shell script:</p>
<p>0,5,10,15,20,25,30,35,40,45,50,55 * * * * /home/wera/projets/hfr-data-processing/hfr_process/download_codar_rt.sh</p>
<p>The data is located in: /home/wera/codar_wera_ogsl/archives/data</p>
<p>&#8216;&#8217;&#8216;3-&#8216;&#8217;&#8217; at H+55min the crontab runs to &#8216;&#8217;&#8216;combine currents for the last hour&#8217;&#8216;&#8217; via a shell script:</p>
<p>55 * * * * /home/wera/projets/hfr-data-processing/hfr_process/ogsl_hfr_treatment.sh</p>
<p>What does the shell do?</p>
<p>1- copy the .ruv and ascii files located in /home/wera/codar_wera_ogsl/archives/data in the working directory /home/wera/codar_wera_ogsl/travail</p>
<p>2- unzip .gz files</p>
<p>3- convert .ruv to .mat format (ruv2mat)</p>
<p>4- convert ascii to .mat format (ascii2mat)</p>
<p>5- generate (combine) total currents (rad2tot)</p>
<p>At this stage a .mat file is generated (i.e. HFR_LSLE_20150817T170000Z.mat) for each hour.</p>
<p>6- the routine currentsHfrWithAverageExport.m computes the 25-hour current average and exports the hourly currents into a .csv file to be displayed on the OGSL website.</p>
<p>7- the .csv files are moved to the webserver (/srv/www/htdocs/wera/hfrdata) and the .mat are moved in archives (/home/wera/codar_wera_ogsl/archives/matfiles and /srv/www/htdocs/wera/hfrmat) and logs are kept in /home/wera/codar_wera_ogsl/logs (download_codar_rt.log, download_wera_rt.log, ogsl_hfr_treatment.log, reprocess_ogsl_hfr_treatment.log)</p>
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